RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 SATB1Q01826 763 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SLC6A3Q01959 620 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 GOLGA8FQ08AF8 430 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 GOLGA8DPQ0D2H9 430 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 GRSF1Q12849 480 aaKnown RBP eCLIP10.33□□□□□ -0.76
GGA3-209ENST00000580646 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 CCINQ13939 588 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 PPP2R5DQ14738 602 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 EML3Q32P44 896 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 TMEM196Q5HYL7 178 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 BSPRYQ5W0U4 402 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 Q6ZS52 159 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SLC26A9Q7LBE3 791 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 XYLT1Q86Y38 959 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 CPA6Q8N4T0 437 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SLC30A5Q8TAD4 765 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 CHFRQ96EP1 664 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 FAM126AQ9BYI3 521 aaPredicted RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 LINC00597Q9H2U6 94 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 CCSER2Q9H7U1 834 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 POPDC2Q9HBU9 364 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 OSER1Q9NX31 292 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 RRN3Q9NYV6 651 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 ARHGAP20Q9P2F6 1191 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 IMPACTQ9P2X3 320 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 DNMT3LQ9UJW3 386 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 CACNA1BQ00975 2339 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 GOLGA6L3A6NEY3 463 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 LILRB5O75023 590 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 ADCY5O95622 1261 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 MBL2P11226 248 aaPredicted RBP10.32□□□□□ -0.76
GGA3-209ENST00000580646 TDGF1P13385 188 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 GALK1P51570 392 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 NRLP54845 237 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 PTP4A2Q12974 167 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 NR1H3Q13133 447 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 NNTQ13423 1086 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
GGA3-209ENST00000580646 ACAD10Q6JQN1 1059 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 WDR59Q6PJI9 974 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 FAM183BPQ6ZVS7 135 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 MON1BQ7L1V2 547 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 TC2NQ8N9U0 490 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 SUMF1Q8NBK3 374 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 CLEC4CQ8WTT0 213 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 RNF139Q8WU17 664 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 CPA5Q8WXQ8 436 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 ATP2A3Q93084 1043 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
GGA3-209ENST00000580646 SLC2A13Q96QE2 648 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 ISCUQ9H1K1 167 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 GRPEL1Q9HAV7 217 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 FBRSL1Q9HCM7 1045 aaKnown RBP10.32□□□□□ -0.76
GGA3-209ENST00000580646 SMPD4Q9NXE4 827 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 TJP2Q9UDY2 1190 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 CPQQ9Y646 472 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
GGA3-209ENST00000580646 KIAA1549LQ6ZVL6 1849 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 MYOFQ9NZM1 2061 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 EP300Q09472 2414 aaPredicted RBP10.31□□□□□ -0.76
GGA3-209ENST00000580646 E2F8A0AVK6 867 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 PIK3R2O00459 728 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 DDX3XO00571 662 aaKnown RBP eCLIP10.31□□□□□ -0.76
GGA3-209ENST00000580646 RTN2O75298 545 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 DAB1O75553 588 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 PAPSS2O95340 614 aaPredicted RBP10.31□□□□□ -0.76
GGA3-209ENST00000580646 NFATC1O95644 943 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 FYNP06241 537 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 MYBL1P10243 752 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 SKILP12757 684 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 DRD1P21728 446 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 FECHP22830 423 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 ADKP55263 362 aaKnown RBP10.31□□□□□ -0.76
GGA3-209ENST00000580646 COG7P83436 770 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 RING1Q06587 406 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 ASTE1Q2TB18 679 aaPredicted RBP10.31□□□□□ -0.76
GGA3-209ENST00000580646 C10orf120Q5SQS8 335 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 OR6B2Q6IFH4 312 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 C3orf20Q8ND61 904 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 CD101Q93033 1021 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 EXOC4Q96A65 974 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 FAM149B1Q96BN6 582 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 OTUB2Q96DC9 234 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 SERPINB11Q96P15 392 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 PANX2Q96RD6 677 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 P2RY13Q9BPV8 354 aa10.31□□□□□ -0.76
GGA3-209ENST00000580646 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
GGA3-209ENST00000580646 NACA2Q9H009 215 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms