RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC39A11Q8N1S5 342 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 OTUD6BQ8N6M0 293 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DPF3Q92784 378 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CXorf56Q9H5V9 222 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MLXIPLQ9NP71 852 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.34e-8■□□□□ 8
CDK5RAP3-217ENST00000580287 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CAPN9O14815 690 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CREB1P16220 341 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SNX16P57768 344 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.38e-9■■■■□ 23.1
CDK5RAP3-217ENST00000580287 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 OTUD1Q5VV17 481 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZDHHC17Q8IUH5 632 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RCOR2Q8IZ40 523 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CCDC185Q8N715 623 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 COLGALT1Q8NBJ5 622 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C5orf42Q9H799 3197 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 M0QYT0 321 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TP73O15350 636 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EFEMP2O95967 443 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CHKAP35790 457 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MATKP42679 507 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 IFNAR2P48551 515 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SULT1E1P49888 294 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PSMD5Q16401 504 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 BSPRYQ5W0U4 402 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FAM109BQ6ICB4 259 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KCTD6Q8NC69 237 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HOMER3Q9NSC5 361 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RIPK2O43353 540 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TJP3O95049 919 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FAM107AO95990 144 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RARGP13631 454 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ITIH2P19823 946 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ROR1Q01973 937 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PTK6Q13882 451 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CCNG2Q16589 344 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ANKS3Q6ZW76 656 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC7A14Q8TBB6 771 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MICAL1Q8TDZ2 1067 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NMUR1Q9HB89 426 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CYLDQ9NQC7 956 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CNGB3Q9NQW8 809 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 OSER1Q9NX31 292 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 WHRNQ9P202 907 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CTNNAL1Q9UBT7 734 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 H0YHG0 523 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LTFP02788 710 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GPR17Q13304 367 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NFE2Q16621 373 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PPP6R3Q5H9R7 873 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLCO2A1Q92959 643 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PIGVQ9NUD9 493 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DNPEPQ9ULA0 475 aa13.16□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 OR6C75A6NL08 312 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms