RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SFTPA1Q8IWL2 248 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 UNC45BQ8IWX7 931 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 CPXM2Q8N436 756 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 ALLCQ8N6M5 410 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 ZNF513Q8N8E2 541 aaPredicted RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 TXNDC5Q8NBS9 432 aaKnown RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 MSANTD4Q8NCY6 345 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 DQX1Q8TE96 717 aaKnown RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 NELL1Q92832 810 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 CPXM1Q96SM3 734 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 EPC1Q9H2F5 836 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 POPDC2Q9HBU9 364 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 ZDHHC4Q9NPG8 344 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 PLCB1Q9NQ66 1216 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 BCCIPQ9P287 314 aaKnown RBP eCLIP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 LIMA1Q9UHB6 759 aaKnown RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 CYTH4Q9UIA0 394 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 MMP17Q9ULZ9 603 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 CEP192Q8TEP8 1941 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 FAM170AA1A519 330 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 SYCE3A1L190 88 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 SMTNL1A8MU46 457 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 AXIN1O15169 862 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 PAPSS1O43252 624 aaPredicted RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TSPAN3O60637 253 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 HSF2BPO75031 334 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 GABBR2O75899 941 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 GFPT2O94808 682 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 LATS1O95835 1130 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 MOCS2O96007 188 aaPredicted RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 CYP11B1P15538 503 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 HOXA6P31267 233 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 CNR2P34972 360 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 CLCN1P35523 988 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TNFRSF4P43489 277 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 KLK7P49862 253 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 DGKEP52429 567 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 YWHAZP63104 245 aaKnown RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TPM4P67936 248 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 MESP2Q0VG99 397 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 SRSF5Q13243 272 aaKnown RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 KLHL40Q2TBA0 621 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 MPPE1Q53F39 396 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 OR6B2Q6IFH4 312 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 SDE2Q6IQ49 451 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 WDR5BQ86VZ2 330 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 CHPFQ8IZ52 775 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 PHTF2Q8N3S3 785 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 CAMKK1Q8N5S9 505 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TMEM35BQ8NCS4 154 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 RUBCNQ92622 972 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 DDX50Q9BQ39 737 aaKnown RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 STK33Q9BYT3 514 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 GANQ9H2C0 597 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 LHX5Q9H2C1 402 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TJP2Q9UDY2 1190 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 NAALADL1Q9UQQ1 740 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 TLR6Q9Y2C9 796 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 NUP205Q92621 2012 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 PLXND1Q9Y4D7 1925 aa11.35□□□□□ -0.59
NDEL1-208ENST00000580237 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 SYNJ2BP-COX16A0A087WUM0 186 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 TRIM24O15164 1050 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 GRAP2O75791 330 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 RPP40O75818 363 aaKnown RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 PENKP01210 267 aaPredicted RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ERBB2P04626 1255 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 HOXB2P14652 356 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 STAT1P42224 750 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 RPL34P49207 117 aaKnown RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ZNF165P49910 485 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 CDK17Q00537 523 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ARID5AQ03989 594 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 RING1Q06587 406 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 NNTQ13423 1086 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 NCAPHQ15003 741 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 CRY1Q16526 586 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 PTPN20Q4JDL3 420 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ADGRF1Q5T601 910 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 EMC10Q5UCC4 262 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 FYB2Q5VWT5 728 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 FAM183BPQ6ZVS7 135 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 ANKS1BQ7Z6G8 1248 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 TMEM110Q86TL2 294 aa11.34□□□□□ -0.59
NDEL1-208ENST00000580237 CCDC117Q8IWD4 279 aaPredicted RBP11.34□□□□□ -0.59
NDEL1-208ENST00000580237 PGBD3Q8N328 593 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms