RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 BBS7Q8IWZ6 715 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 TMTC2Q8N394 836 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 NCOA7Q8NI08 942 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 NKD1Q969G9 470 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 CENPTQ96BT3 561 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 SERAC1Q96JX3 654 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 SLITRK1Q96PX8 696 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 PISDQ9UG56 409 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 ZNF840PA6NDX5 716 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 PIAS2O75928 621 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 DNTTP04053 509 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 JMJD7P0C870 316 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 CCKBRP32239 447 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 ZNF177Q13360 481 aaPredicted RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 SPIDRQ14159 915 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 INPP5JQ15735 1006 aaPredicted RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 ZBTB6Q15916 424 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 ZCCHC8Q6NZY4 707 aaKnown RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 GUSBP11Q6P575 273 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 RALYLQ86SE5 291 aaKnown RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 FANCBQ8NB91 859 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 OR2T34Q8NGX1 318 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 SLC45A3Q96JT2 553 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 TTLL2Q9BWV7 592 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 CHMP4BQ9H444 224 aaKnown RBP6.43□□□□□ -1.38
CCDC178-209ENST00000579947 KLHL11Q9NVR0 708 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 NCKAP1Q9Y2A7 1128 aa6.43□□□□□ -1.38
CCDC178-209ENST00000579947 PTPRJQ12913 1337 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 NEDD8-MDP1E9PL57 170 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 MBL2P11226 248 aaPredicted RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 HGFP14210 728 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 NAMPTP43490 491 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 LILRA4P59901 499 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 OSTNP61366 133 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 MOXD1Q6UVY6 613 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 TMPRSS9Q7Z410 1059 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 MB21D2Q8IYB1 491 aaPredicted RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 TMEM130Q8N3G9 435 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 GOLGA1Q92805 767 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 SPATA17Q96L03 361 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 BBS2Q9BXC9 721 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 DLL4Q9NR61 685 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 UBQLN1Q9UMX0 589 aaKnown RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 SCML1Q9UN30 329 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 SH3BP1Q9Y3L3 701 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 PCDHA5Q9Y5H7 936 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 KLF2Q9Y5W3 355 aaPredicted RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CCDC69A6NI79 296 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 LRRC72A6NJI9 287 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 C9orf172C9J069 976 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 K7ESM1 405 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 SCAMP1O15126 338 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CBX6O95503 412 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 EPHX1P07099 455 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 RXRAP19793 462 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CSTF2P33240 577 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CLCN1P35523 988 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 EFNA5P52803 228 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 SKOR2Q2VWA4 1001 aaPredicted RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 ZNF568Q3ZCX4 644 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CRTC2Q53ET0 693 aaPredicted RBP6.42□□□□□ -1.38
CCDC178-209ENST00000579947 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 NCEH1Q6PIU2 408 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 BSNDQ8WZ55 320 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 USP7Q93009 1102 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 DYDC2Q96IM9 177 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 TSPAN18Q96SJ8 248 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 EHD2Q9NZN4 543 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 LOXL2Q9Y4K0 774 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 KCTD3Q9Y597 815 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 NUMA1Q14980 2115 aa6.42□□□□□ -1.38
CCDC178-209ENST00000579947 CPED1A4D0V7 1026 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 STMND1H3BQB6 276 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 SDSP20132 328 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 PROZP22891 400 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 NUDT1P36639 197 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 NR0B2Q15466 257 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 SLC10A6Q3KNW5 377 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 NUGGCQ68CJ6 796 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 DEPTORQ8TB45 409 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 ACO2Q99798 780 aaKnown RBP6.41□□□□□ -1.38
CCDC178-209ENST00000579947 PABPC3Q9H361 631 aaKnown RBP6.41□□□□□ -1.38
CCDC178-209ENST00000579947 PLEKHA5Q9HAU0 1116 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 RBM28Q9NW13 759 aaKnown RBP6.41□□□□□ -1.38
CCDC178-209ENST00000579947 NEMP2A6NFY4 417 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 ABLIM1O14639 778 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 DUX1O43812 170 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 LIG1P18858 919 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 CYP2F1P24903 491 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 MAGEA11P43364 429 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 TSPY1Q01534 308 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 SFSWAPQ12872 951 aaKnown RBP6.41□□□□□ -1.38
CCDC178-209ENST00000579947 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 PDIA5Q14554 519 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 EIF4HQ15056 248 aaKnown RBP6.41□□□□□ -1.38
CCDC178-209ENST00000579947 CDKN3Q16667 212 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 DEFB109BQ30KR1 87 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
CCDC178-209ENST00000579947 CCDC83Q8IWF9 413 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms