RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CELSR3Q9NYQ7 3312 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 GOLGA6L10A0A0M3HER8 536 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SPAARA0A1B0GVQ0 90 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 CCDC188H7C350 402 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 PODXLO00592 558 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 CDX4O14627 284 aaPredicted RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SRGAP2O75044 1071 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 RNF40O75150 1001 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SLC1A1P43005 524 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SNX16P57768 344 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 CENPCQ03188 943 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 GRSF1Q12849 480 aaKnown RBP eCLIP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 STILQ15468 1287 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 COL28A1Q2UY09 1125 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 JADE1Q6IE81 842 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SPOPLQ6IQ16 392 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 FSTL4Q6MZW2 842 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ZNF280DQ6N043 979 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 PROSER1Q86XN7 944 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ZNF564Q8TBZ8 553 aaPredicted RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ACTRT1Q8TDG2 376 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 TSC1Q92574 1164 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 SLC32A1Q9H598 525 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 APOBEC3GQ9HC16 384 aaKnown RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 DPP3Q9NY33 737 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 CNOT8Q9UFF9 292 aaKnown RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 AFF4Q9UHB7 1163 aaKnown RBP14.7□□□□□ -0.06
SREBF1-217ENST00000577897 STRIP2Q9ULQ0 834 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 GPSM3Q9Y4H4 160 aa14.7□□□□□ -0.06
SREBF1-217ENST00000577897 ASCC3Q8N3C0 2202 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CCDC66A2RUB6 948 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 PGRMC1O00264 195 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 SYN3O14994 580 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 RRP9O43818 475 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CST3P01034 146 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 ITGB3P05106 788 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 UNGP13051 313 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 H2AFXP16104 143 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CETN2P41208 172 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 PNPLA4P41247 253 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 WNT7BP56706 349 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 SIM1P81133 766 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 SOX4Q06945 474 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 GPS2Q13227 327 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 SLC10A6Q3KNW5 377 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 RNF19BQ6ZMZ0 732 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CYP2U1Q7Z449 544 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 NT5DC3Q86UY8 548 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 TMC8Q8IU68 726 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 EFCAB13Q8IY85 973 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 SPATA4Q8NEY3 305 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 BPIFB1Q8TDL5 484 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 HNRNPLLQ8WVV9 542 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 ZNF560Q96MR9 790 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 PGLYRP2Q96PD5 576 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 MMS19Q96T76 1030 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 NUP85Q9BW27 656 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 PARD6BQ9BYG5 372 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CARD9Q9H257 536 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 ATXN3LQ9H3M9 355 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 ACBD3Q9H3P7 528 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 ADAM22Q9P0K1 906 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 NXF1Q9UBU9 619 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 UBQLN1Q9UMX0 589 aaKnown RBP14.69□□□□□ -0.06
SREBF1-217ENST00000577897 CACNA1EQ15878 2313 aa14.69□□□□□ -0.06
SREBF1-217ENST00000577897 MYO1FO00160 1098 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 SPOPO43791 374 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 CEP104O60308 925 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 BUB1BO60566 1050 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-217ENST00000577897 EGFP01133 1207 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 CYP1A1P04798 512 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-217ENST00000577897 NFICP08651 508 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 MAPK8P45983 427 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 DGKEP52429 567 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 ZNF132P52740 706 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 IRX4P78413 519 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 WDR72Q3MJ13 1102 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 TMEM196Q5HYL7 178 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 GPR158Q5T848 1215 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 SEL1L2Q5TEA6 688 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 WDR93Q6P2C0 686 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 PHF13Q86YI8 300 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-217ENST00000577897 MCOLN2Q8IZK6 566 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 LRRC52Q8N7C0 313 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 CEP120Q8N960 986 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 HES6Q96HZ4 224 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 PARVAQ9NVD7 372 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 TAS2R14Q9NYV8 317 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 RAB21Q9UL25 225 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 PCDHGC3Q9UN70 934 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 AGAP1Q9UPQ3 857 aa14.68□□□□□ -0.06
SREBF1-217ENST00000577897 TENM4Q6N022 2769 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms