RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 SOWAHCQ53LP3 525 aaPredicted RBP10.51□□□□□ -0.73
CRLF3-202ENST00000577725 RAB41Q5JT25 222 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 TXNRD3NBQ6F5E7 133 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
CRLF3-202ENST00000577725 PRR23CQ6ZRP0 262 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CCDC149Q6ZUS6 474 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 SLC26A9Q7LBE3 791 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 BHLHA9Q7RTU4 235 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 DEFB106AQ8N104 65 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 ARFGAP1Q8N6T3 406 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 GIPC2Q8TF65 315 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 FAM149B1Q96BN6 582 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
CRLF3-202ENST00000577725 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 L2HGDHQ9H9P8 463 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 DZANK1Q9NVP4 752 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 RAB23Q9ULC3 237 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 BACE2Q9Y5Z0 518 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 SYNJ2BP-COX16A0A087WUM0 186 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 YJEFN3A6XGL0 299 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 E7ENQ6 273 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 DPYSL4O14531 572 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 GDF9O60383 454 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 FOXD2O60548 495 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 FBXO21O94952 628 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 SEC24AO95486 1093 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 ZBED1O96006 694 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 HAPLN1P10915 354 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 SRFP11831 508 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 TCP1P17987 556 aaKnown RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 MAN1A1P33908 653 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 SLC1A1P43005 524 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 MAGEA11P43364 429 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 PGFP49763 221 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 PEX5P50542 639 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 USP46P62068 366 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 GPR17Q13304 367 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 WHAMMP3Q1A5X7 153 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 LAIR1Q6GTX8 287 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 UBL4BQ8N7F7 174 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 C12orf76Q8N812 135 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 EDEM1Q92611 657 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 NELL1Q92832 810 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 FUBP3Q96I24 572 aaKnown RBP eCLIP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 PEBP4Q96S96 227 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 TBCBQ99426 244 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 UBXN6Q9BZV1 441 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 ZWILCHQ9H900 591 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 SEMA4GQ9NTN9 838 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 COX16Q9P0S2 106 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 PCSK1NQ9UHG2 260 aa10.5□□□□□ -0.73
CRLF3-202ENST00000577725 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
CRLF3-202ENST00000577725 MYO10Q9HD67 2058 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 GREB1Q4ZG55 1949 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 MIF4GDA9UHW6 222 aaKnown RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 TNFRSF10BO14763 440 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 TRIM66O15016 1216 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 HSF2BPO75031 334 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 LRCH4O75427 683 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SLU7O95391 586 aaKnown RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CXCL14O95715 111 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 LTFP02788 710 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 KRT1P04264 644 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 RETP07949 1114 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SPATA31D3P0C874 917 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 IL1R2P27930 398 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 MIPP30301 263 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SDC4P31431 198 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CTNNA1P35221 906 aaKnown RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SULT1E1P49888 294 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 KRT17Q04695 432 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 C2orf54Q08AI8 447 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 PIGHQ14442 188 aaPredicted RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CSRP2Q16527 193 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SMTNL2Q2TAL5 461 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CFAP221Q4G0U5 840 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 EFHC1Q5JVL4 640 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 OTUD1Q5VV17 481 aaPredicted RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SLC8B1Q6J4K2 584 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 VSTM1Q6UX27 236 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SPATA31D4Q6ZUB0 917 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ADAT2Q7Z6V5 191 aaKnown RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CREG2Q8IUH2 290 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ZDHHC17Q8IUH5 632 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 NIPA2Q8N8Q9 360 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ADAM32Q8TC27 787 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 SPPL2BQ8TCT7 592 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 TSC1Q92574 1164 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 PBKQ96KB5 322 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 C8orf48Q96LL4 319 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms