RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 CAPN10Q9HC96 672 aa15.94■□□□□ 0.14
CTNS-209ENST00000574776 RMND1Q9NWS8 449 aa15.94■□□□□ 0.14
CTNS-209ENST00000574776 THAP10Q9P2Z0 257 aaPredicted RBP15.94■□□□□ 0.14
CTNS-209ENST00000574776 WASF3Q9UPY6 502 aa15.94■□□□□ 0.14
CTNS-209ENST00000574776 C1QTNF9BB2RNN3 333 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 CYBBP04839 570 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 PROS1P07225 676 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 C1QTNF9P0C862 333 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 MAOBP27338 520 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 IL12RB1P42701 662 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 PMS1P54277 932 aaKnown RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 FKBP3Q00688 224 aaKnown RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 LRMPQ12912 555 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 SEMA3BQ13214 749 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 CUL2Q13617 745 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 STARD3Q14849 445 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 FUT11Q495W5 492 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 ZNF658Q5TYW1 1059 aaPredicted RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 PIP4P1Q86T03 277 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 HDDC3Q8N4P3 179 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 OR2I1PQ8NGU4 316 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 UBA3Q8TBC4 463 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 DDI1Q8WTU0 396 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 UCMAQ8WVF2 138 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 ERCC4Q92889 916 aaPredicted RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 PIWIL1Q96J94 861 aaKnown RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 TSG101Q99816 390 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 FAM124BQ9H5Z6 455 aaPredicted RBP15.93■□□□□ 0.14
CTNS-209ENST00000574776 PRDM16Q9HAZ2 1276 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 LRRC4Q9HBW1 653 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 ELOVL2Q9NXB9 296 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 TSPAN16Q9UKR8 245 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 COQ4Q9Y3A0 265 aa15.93■□□□□ 0.14
CTNS-209ENST00000574776 SPAARA0A1B0GVQ0 90 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 ARHGAP33O14559 1287 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 XPO1O14980 1071 aaKnown RBP15.92■□□□□ 0.14
CTNS-209ENST00000574776 OPHN1O60890 802 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 CD19P15391 556 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 CD6P30203 668 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 TRIP4Q15650 581 aaPredicted RBP15.92■□□□□ 0.14
CTNS-209ENST00000574776 SGO2Q562F6 1265 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 BHLHA9Q7RTU4 235 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 RABEPKQ7Z6M1 372 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 CPXM2Q8N436 756 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 MINDY1Q8N5J2 469 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 SORCS1Q8WY21 1168 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 EDEM1Q92611 657 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 SCNM1Q9BWG6 230 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 MKRN2Q9H000 416 aaKnown RBP15.92■□□□□ 0.14
CTNS-209ENST00000574776 ITM2CQ9NQX7 267 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 HESX1Q9UBX0 185 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 SFMBT1Q9UHJ3 866 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 CHD6Q8TD26 2715 aa15.92■□□□□ 0.14
CTNS-209ENST00000574776 TRIM49BA6NDI0 452 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 GOLGA6L4A6NEF3 574 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 UPK3BL1B0FP48 263 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 UPK3BL2E5RIL1 263 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 NPC1O15118 1278 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 SLC16A3O15427 465 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 SYNCRIPO60506 623 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 TSPAN3O60637 253 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 SYPP08247 313 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 BCAT1P54687 386 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 SIM1P81133 766 aaPredicted RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 BST2Q10589 180 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 ENPP2Q13822 863 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 ZNF234Q14588 700 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 PLEKHG6Q3KR16 790 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 COBLL1Q53SF7 1204 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 SYCP2LQ5T4T6 812 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 BSPRYQ5W0U4 402 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 TMEM215Q68D42 235 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 UNQ6494/PRO21346Q6UXR6 183 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 ANKS1BQ7Z6G8 1248 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 METTL3Q86U44 580 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 TMPRSS6Q8IU80 811 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 ZC3H3Q8IXZ2 948 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 RNF139Q8WU17 664 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 FOXJ1Q92949 421 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 PLD4Q96BZ4 506 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 TOE1Q96GM8 510 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 IPO9Q96P70 1041 aaKnown RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 SLC2A11Q9BYW1 496 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 CIPCQ9C0C6 399 aa15.91■□□□□ 0.14
CTNS-209ENST00000574776 WSB2Q9NYS7 404 aaPredicted RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 ARMCX3Q9UH62 379 aaPredicted RBP15.91■□□□□ 0.14
CTNS-209ENST00000574776 YJEFN3A6XGL0 299 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 KCNJ18B7U540 433 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 E7ENQ6 273 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 TIMM44O43615 452 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 SMC2O95347 1197 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 VDRP11473 427 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 LCP1P13796 627 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 HARS2P49590 506 aaKnown RBP15.9■□□□□ 0.14
CTNS-209ENST00000574776 ZNF132P52740 706 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 YWHAEP62258 255 aaKnown RBP15.9■□□□□ 0.14
CTNS-209ENST00000574776 ADIGQ0VDE8 80 aa15.9■□□□□ 0.14
CTNS-209ENST00000574776 MPPE1Q53F39 396 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms