RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 BECN2A8MW95 431 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 LRP3O75074 770 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 ALDH1A2O94788 518 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 RHOBTB1O94844 696 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 PENKP01210 267 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 ZNF806P0C7X5 589 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 PNMA6AP0CW24 399 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 KCNA4P22459 653 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 NTSR1P30989 418 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 P2RY2P41231 377 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 MFAP3P55082 362 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 GCNT1Q02742 428 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 TRIP4Q15650 581 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 ELF2Q15723 593 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 DPCR1Q3MIW9 517 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 PMS2CLQ68D20 193 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 TRIM65Q6PJ69 517 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 C12orf50Q8NA57 414 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 NETO1Q8TDF5 533 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 MYEOVQ96EZ4 313 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 CDK5RAP1Q96SZ6 601 aaKnown RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 DCLK3Q9C098 648 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 CNGB3Q9NQW8 809 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 FBXO10Q9UK96 956 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 STARD13Q9Y3M8 1113 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
RPAIN-214ENST00000574003 SLC30A4O14863 429 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 THAP12O43422 761 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 CAVIN2O95810 425 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 LTFP02788 710 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 FYNP06241 537 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 NDUFV2P19404 249 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 USP8P40818 1118 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 PTGER3P43115 390 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 GPD2P43304 727 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 HSF5Q4G112 596 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-214ENST00000574003 TMEM215Q68D42 235 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 RFWD3Q6PCD5 774 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 ADAM32Q8TC27 787 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 WFDC5Q8TCV5 224 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
RPAIN-214ENST00000574003 DDI1Q8WTU0 396 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 PIGKQ92643 395 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 PLD4Q96BZ4 506 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 PIWIL1Q96J94 861 aaKnown RBP11.82□□□□□ -0.52
RPAIN-214ENST00000574003 FSCN3Q9NQT6 498 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 ST7Q9NRC1 585 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 CNTN6Q9UQ52 1028 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 NAALADL1Q9UQQ1 740 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 ZNF510Q9Y2H8 683 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
RPAIN-214ENST00000574003 NUMA1Q14980 2115 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 ASCC3Q8N3C0 2202 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 MAP3K13O43283 966 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 FGFR1OPO95684 399 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 PON1P27169 355 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 HOXD9P28356 352 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 SLC6A4P31645 630 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CHKAP35790 457 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 IL12RB1P42701 662 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 PITX1P78337 314 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 NADSYN1Q6IA69 706 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 MSANTD2Q6P1R3 559 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CYP2U1Q7Z449 544 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CACUL1Q86Y37 369 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 FAM217AQ8IXS0 508 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 SCML4Q8N228 414 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CPXM2Q8N436 756 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CYB5D2Q8WUJ1 264 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 ZNF606Q8WXB4 792 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 RTKNQ9BST9 563 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 VPS45Q9NRW7 570 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 ABCC13Q9NSE7 274 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 OLA1Q9NTK5 396 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 CYP8B1Q9UNU6 501 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 HBS1LQ9Y450 684 aaKnown RBP11.81□□□□□ -0.52
RPAIN-214ENST00000574003 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
RPAIN-214ENST00000574003 LAMA1P25391 3075 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 E5RJQ4 531 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 GFRA2O00451 464 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 PAPSS1O43252 624 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 CYBBP04839 570 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 NCAM1P13591 858 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms