RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 C12orf40Q86WS4 652 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
NDE1-206ENST00000572967 SFTPA1Q8IWL2 248 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 SLC20A1Q8WUM9 679 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 OVCA2Q8WZ82 227 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 DDX1Q92499 740 aaKnown RBP12.4□□□□□ -0.42
NDE1-206ENST00000572967 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 ACDQ96AP0 544 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
NDE1-206ENST00000572967 HSFY1Q96LI6 401 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
NDE1-206ENST00000572967 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 UBXN6Q9BZV1 441 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 NACA2Q9H009 215 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 ADAMTS1Q9UHI8 967 aa12.4□□□□□ -0.42
NDE1-206ENST00000572967 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.4□□□□□ -0.42
NDE1-206ENST00000572967 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
NDE1-206ENST00000572967 RIF1Q5UIP0 2472 aaKnown RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 TNFRSF10BO14763 440 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 ATG13O75143 517 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 NDUFA10O95299 355 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 MMEP08473 750 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 ADH5P11766 374 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 DESP17661 470 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 PGFP49763 221 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 CENPCQ03188 943 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 C1QBPQ07021 282 aaKnown RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 DMC1Q14565 340 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 DHCR24Q15392 516 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 CLEC20AQ6ZU45 233 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 DGLUCYQ7Z3D6 616 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 SIX6OS1Q8N1H7 587 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 WBP2Q969T9 261 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 VCPIP1Q96JH7 1222 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 LRRC4Q9HBW1 653 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 WDR35Q9P2L0 1181 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
NDE1-206ENST00000572967 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 SH3BP1Q9Y3L3 701 aa12.39□□□□□ -0.43
NDE1-206ENST00000572967 GPR179Q6PRD1 2367 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 SLC9A3R1O14745 358 aaPredicted RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 TLR5O60602 858 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 RTN2O75298 545 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 FBXO21O94952 628 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 ADH1CP00326 375 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CCDC175P0C221 793 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 TUBP50607 506 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 NOMO3P69849 1222 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 LMNB2Q03252 620 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 MESP2Q0VG99 397 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 PDCLQ13371 301 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CCDC6Q16204 474 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 NAA35Q5VZE5 725 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 ERMP1Q7Z2K6 904 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 GOLGA1Q92805 767 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 CHP1Q99653 195 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 TPSD1Q9BZJ3 242 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 TSGA10Q9BZW7 698 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 FBXO44Q9H4M3 255 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 CSNK1G1Q9HCP0 422 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 ACP6Q9NPH0 428 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 COMMD8Q9NX08 183 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 LCMT1Q9UIC8 334 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 EPN1Q9Y6I3 576 aaPredicted RBP12.38□□□□□ -0.43
NDE1-206ENST00000572967 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
NDE1-206ENST00000572967 TNRC6BQ9UPQ9 1833 aaKnown RBP12.37□□□□□ -0.43
NDE1-206ENST00000572967 MED19A0JLT2 244 aaPredicted RBP12.37□□□□□ -0.43
NDE1-206ENST00000572967 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
NDE1-206ENST00000572967 SOWAHDA6NJG2 315 aa12.37□□□□□ -0.43
NDE1-206ENST00000572967 HHLA1C9JL84 531 aa12.37□□□□□ -0.43
NDE1-206ENST00000572967 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
NDE1-206ENST00000572967 MDM4O15151 490 aa12.37□□□□□ -0.43
NDE1-206ENST00000572967 AXIN1O15169 862 aa12.37□□□□□ -0.43
NDE1-206ENST00000572967 ZSCAN12O43309 604 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms