RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 WDR49Q8IV35 697 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 LSMEM2Q8N112 164 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 OXR1Q8N573 874 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SCAMP5Q8TAC9 235 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SAP25Q8TEE9 199 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SNX19Q92543 992 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 BIRC7Q96CA5 298 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SAAL1Q96ER3 474 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SMARCD1Q96GM5 515 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 PIWIL1Q96J94 861 aaKnown RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 HIC2Q96JB3 615 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 MMS19Q96T76 1030 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 LGMNQ99538 433 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 MRPL45Q9BRJ2 306 aaKnown RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ORAI3Q9BRQ5 295 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ACE2Q9BYF1 805 aaPredicted RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 B3GNT5Q9BYG0 378 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SLC2A11Q9BYW1 496 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 BTBD1Q9H0C5 482 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 LHX5Q9H2C1 402 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ZHX3Q9H4I2 956 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 C6orf106Q9H6K1 298 aaPredicted RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SGK2Q9HBY8 427 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ELOVL2Q9NXB9 296 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 CHORDC1Q9UHD1 332 aaPredicted RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 TPX2Q9ULW0 747 aaKnown RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SLCO1B1Q9Y6L6 691 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 C10orf142B7Z368 130 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 SEMA4FO95754 770 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 IRF1P10914 325 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 ACSL1P33121 698 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 ERVPABLB-1P60509 514 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 CCDC157Q569K6 752 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 FYB2Q5VWT5 728 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 ADAT2Q7Z6V5 191 aaKnown RBP10.67□□□□□ -0.7
CHMP6-203ENST00000572525 FAM35AQ86V20 835 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 ZSWIM2Q8NEG5 633 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 OR5B17Q8NGF7 314 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 SNX21Q969T3 373 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 HNRNPABQ99729 332 aaKnown RBP10.67□□□□□ -0.7
CHMP6-203ENST00000572525 DPH1Q9BZG8 443 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 TRIM9Q9C026 710 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 SEMA4CQ9C0C4 833 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 MRPL44Q9H9J2 332 aaKnown RBP10.67□□□□□ -0.7
CHMP6-203ENST00000572525 ERVMER34-1Q9H9K5 563 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 KIAA1586Q9HCI6 787 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 CSNK1G1Q9HCP0 422 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 SCML1Q9UN30 329 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 CLCA2Q9UQC9 943 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 COL27A1Q8IZC6 1860 aaPredicted RBP10.67□□□□□ -0.7
CHMP6-203ENST00000572525 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
CHMP6-203ENST00000572525 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 A0A1W2PPC4 97 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF233A6NK53 670 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 RRP9O43818 475 aaKnown RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 BMP15O95972 392 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 EPHX1P07099 455 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 GLDCP23378 1020 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ACP1P24666 158 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 PRKCHP24723 683 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 DDIT3P35638 169 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 LONP1P36776 959 aaKnown RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 PLA2G4AP47712 749 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 RXRGP48443 463 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ARRB1P49407 418 aaPredicted RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 PSEN1P49768 467 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 C21orf59P57076 290 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ASIC1P78348 528 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 KCNA1Q09470 495 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 DHX8Q14562 1220 aaKnown RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 GEN1Q17RS7 908 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 TTC31Q49AM3 519 aaPredicted RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 KCNT1Q5JUK3 1230 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 SFMBT2Q5VUG0 894 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 IGF2-ASQ6U949 168 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 XKR5Q6UX68 686 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 SERPINA13PQ6UXR4 307 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 USP49Q70CQ1 688 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 USP30Q70CQ3 517 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 TRAPPC11Q7Z392 1133 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 GOLGA1Q92805 767 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ERLEC1Q96DZ1 483 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 TNIP3Q96KP6 325 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ZSCAN31Q96LW9 406 aaPredicted RBP10.66□□□□□ -0.7
CHMP6-203ENST00000572525 KCNK16Q96T55 309 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 CBWD1Q9BRT8 395 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 DCLK3Q9C098 648 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 IKZF4Q9H2S9 585 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 PNPLA8Q9NP80 782 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 STK17AQ9UEE5 414 aa10.66□□□□□ -0.7
CHMP6-203ENST00000572525 ADAMTS1Q9UHI8 967 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms