RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 WDFY3Q8IZQ1 3526 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 DSPP15924 2871 aaKnown RBP13.97□□□□□ -0.17
CCDC40-205ENST00000571028 NUP210Q8TEM1 1887 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 LRRC53A6NM62 1247 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 HHLA1C9JL84 531 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 RTN3O95197 1032 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 LCP1P13796 627 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 CYP11B1P15538 503 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 ENGP17813 658 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 BCKDHBP21953 392 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 PBX1P40424 430 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 DPP6P42658 865 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 TAF10Q12962 218 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 MTF1Q14872 753 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 STILQ15468 1287 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 ASIC2Q16515 512 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 NOP9Q86U38 636 aaKnown RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 NUP58Q9BVL2 599 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 ECT2Q9H8V3 914 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 TRPC7Q9HCX4 862 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 DUS2Q9NX74 493 aaKnown RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 UXTQ9UBK9 157 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 CHORDC1Q9UHD1 332 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-205ENST00000571028 DAAM1Q9Y4D1 1078 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 AKAP13Q12802 2813 aa13.96□□□□□ -0.17
CCDC40-205ENST00000571028 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 F11P03951 625 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 CFIP05156 583 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 MMEP08473 750 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 TKTL1P51854 596 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 SEC13P55735 322 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 GOLGA8FQ08AF8 430 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 GOLGA8DPQ0D2H9 430 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 SOWAHCQ53LP3 525 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 SFMBT2Q5VUG0 894 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 TMC6Q7Z403 805 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 BAP1Q92560 729 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 NDRG1Q92597 394 aaKnown RBP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 GTPBP2Q9BX10 602 aaKnown RBP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 GMIPQ9P107 970 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 GPSM3Q9Y4H4 160 aa13.95□□□□□ -0.18
CCDC40-205ENST00000571028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC40-205ENST00000571028 NBEAQ8NFP9 2946 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 CASP14P31944 242 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF75DP51815 510 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF268Q14587 947 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-205ENST00000571028 COL28A1Q2UY09 1125 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 LYSMD4Q5XG99 296 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 SPECC1LQ69YQ0 1117 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 SARM1Q6SZW1 724 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 VSTM4Q8IW00 320 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 C1orf131Q8NDD1 294 aaKnown RBP13.94□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-205ENST00000571028 MDGA1Q8NFP4 955 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 OSCP1Q8WVF1 389 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
CCDC40-205ENST00000571028 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 MIS12Q9H081 205 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
CCDC40-205ENST00000571028 DMXL2Q8TDJ6 3036 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 OPHN1O60890 802 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 TADA3O75528 432 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 CKMP06732 381 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 TPM1P09493 284 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 SKILP12757 684 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 FERP16591 822 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 GPD2P43304 727 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 KIF11P52732 1056 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-205ENST00000571028 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 SCAPQ12770 1279 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
CCDC40-205ENST00000571028 HNRNPDQ14103 355 aaKnown RBP13.93□□□□□ -0.18
CCDC40-205ENST00000571028 MON1AQ86VX9 555 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 DRC7Q8IY82 874 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 TMEFF1Q8IYR6 380 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 CCDC33Q8N5R6 958 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 EPS8L1Q8TE68 723 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 SLC35F5Q8WV83 523 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms