RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 HPSEQ9Y251 543 aa8.78□□□□□ -1
SNX29-208ENST00000569801 PCDH15Q96QU1 1955 aa8.77□□□□□ -1
SNX29-208ENST00000569801 TRAV19A0A0A6YYK7 116 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 ARHGAP10A1A4S6 786 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 C2orf78A6NCI8 922 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 CKMP06732 381 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 ARSAP15289 507 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 BDNFP23560 247 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 CMA1P23946 247 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 GNL1P36915 607 aaPredicted RBP8.77□□□□□ -1.01
SNX29-208ENST00000569801 GRIK1P39086 918 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 P2RY2P41231 377 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 CACNA2D1P54289 1103 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 MYL6P60660 151 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 TNNC1P63316 161 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 FAM160A1Q05DH4 1040 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 GRSF1Q12849 480 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNX29-208ENST00000569801 GRIK2Q13002 908 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 USP4Q13107 963 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 TRPC3Q13507 836 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 MTF1Q14872 753 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 MAPRE1Q15691 268 aaKnown RBP8.77□□□□□ -1.01
SNX29-208ENST00000569801 ZNF77Q15935 545 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 WDR72Q3MJ13 1102 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 MDH1BQ5I0G3 518 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 HES3Q5TGS1 186 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 TDRD10Q5VZ19 366 aaKnown RBP8.77□□□□□ -1.01
SNX29-208ENST00000569801 VSTM1Q6UX27 236 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 DBX2Q6ZNG2 339 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 DENND5BQ6ZUT9 1274 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 ARL14EPQ8N8R7 260 aaPredicted RBP8.77□□□□□ -1.01
SNX29-208ENST00000569801 GOLGA5Q8TBA6 731 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 ELMO3Q96BJ8 720 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 SPATA17Q96L03 361 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 CYP2S1Q96SQ9 504 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 KCTD10Q9H3F6 313 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 SMYD3Q9H7B4 428 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 TM7SF3Q9NS93 570 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 EXOC1Q9NV70 894 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 TMEM30AQ9NV96 361 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 DMAC2Q9NW81 257 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 GCNT4Q9P109 453 aa8.77□□□□□ -1.01
SNX29-208ENST00000569801 FAM237AA0A1B0GTK4 181 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 LRRIQ3A6PVS8 624 aaPredicted RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 F8VP50 259 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 TRIM66O15016 1216 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 C4BPAP04003 597 aaKnown RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 FAM163BP0C2L3 166 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 USP17L7P0C7H9 530 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 PTPN1P18031 435 aaKnown RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 ANXA13P27216 316 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 PI4KAP42356 2102 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 NDUFA8P51970 172 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 CDH8P55286 799 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 DLG4P78352 724 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 CLDN10P78369 228 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 KRT85P78386 507 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 ZXDBP98169 803 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 PSMD2Q13200 908 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 BIRC3Q13489 604 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 PDGFRLQ15198 375 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 TMEM196Q5HYL7 178 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 NAIF1Q69YI7 327 aaPredicted RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 CC2D1AQ6P1N0 951 aaPredicted RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 RASSF3Q86WH2 238 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 SLC9A9Q8IVB4 645 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 MCEMP1Q8IX19 187 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 RPLP0P6Q8NHW5 317 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 OLIG1Q8TAK6 271 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 PARD3BQ8TEW8 1205 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 TMEM174Q8WUU8 243 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 OSCP1Q8WVF1 389 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 SYAP1Q96A49 352 aaPredicted RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 SPACA7Q96KW9 195 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 CNOT6LQ96LI5 555 aaKnown RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 SPATA32Q96LK8 384 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 CEP295NLQ96MC4 621 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 TTLL2Q9BWV7 592 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 B3GNT5Q9BYG0 378 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 ZNF518BQ9C0D4 1074 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 SDCBP2Q9H190 292 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 SNX25Q9H3E2 840 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 FBRSL1Q9HCM7 1045 aaKnown RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 GEMIN8Q9NWZ8 242 aaKnown RBP8.76□□□□□ -1.01
SNX29-208ENST00000569801 GMIPQ9P107 970 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 USP25Q9UHP3 1055 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 ANAPC2Q9UJX6 822 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 ARHGAP26Q9UNA1 814 aa8.76□□□□□ -1.01
SNX29-208ENST00000569801 ZNF840PA6NDX5 716 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 A8MXQ7 604 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 CLDN5O00501 218 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 PDXKO00764 312 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 TRDMT1O14717 391 aaKnown RBP8.75□□□□□ -1.01
SNX29-208ENST00000569801 MTSS1O43312 755 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 PHACTR2O75167 634 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 VNN1O95497 513 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 OLFM2O95897 454 aa8.75□□□□□ -1.01
SNX29-208ENST00000569801 EGFP01133 1207 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms