RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RAPGEF1Q13905 1077 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 DRAP1Q14919 205 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 MEA1Q16626 185 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 TSR1Q2NL82 804 aaKnown RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 PREPLQ4J6C6 727 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 SFMBT2Q5VUG0 894 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 PRR23BQ6ZRT6 265 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 NUDT18Q6ZVK8 323 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 SHC3Q92529 594 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 BHMTQ93088 406 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 XPO6Q96QU8 1125 aaKnown RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 BBS2Q9BXC9 721 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 DCLK3Q9C098 648 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 MIS12Q9H081 205 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 OLA1Q9NTK5 396 aaKnown RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 WDR35Q9P2L0 1181 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 RAB23Q9ULC3 237 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 KIF26AQ9ULI4 1882 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-225ENST00000569245 ZNF510Q9Y2H8 683 aa15.13■□□□□ 0.01
COMMD4-225ENST00000569245 CORO1AP31146 461 aaKnown RBP15.12■□□□□ 0.01
COMMD4-225ENST00000569245 HOXC13P31276 330 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 SOX5P35711 763 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 DENND1BQ6P3S1 775 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 WDR59Q6PJI9 974 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 TMEM139Q8IV31 216 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 DENND1CQ8IV53 801 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 SUMF1Q8NBK3 374 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 USP33Q8TEY7 942 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 ZNF606Q8WXB4 792 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 HSFY1Q96LI6 401 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 HHIPQ96QV1 700 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 ABCC13Q9NSE7 274 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 DNAJC17Q9NVM6 304 aaKnown RBP15.12■□□□□ 0.01
COMMD4-225ENST00000569245 ZNHIT6Q9NWK9 470 aaKnown RBP15.12■□□□□ 0.01
COMMD4-225ENST00000569245 NCDNQ9UBB6 729 aa15.12■□□□□ 0.01
COMMD4-225ENST00000569245 SMG5Q9UPR3 1016 aaKnown RBP15.12■□□□□ 0.01
COMMD4-225ENST00000569245 FOXN3O00409 490 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 NRDCO43847 1150 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 TULP3O75386 442 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 FBXO21O94952 628 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 KLKB1P03952 638 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 TYRP14679 529 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 FERP16591 822 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 HOXA6P31267 233 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CNR2P34972 360 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 TIE1P35590 1138 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 PRKCIP41743 596 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 TNFRSF4P43489 277 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 HARS2P49590 506 aaKnown RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 DAOAP59103 153 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CCZ1BP86790 482 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 MESP2Q0VG99 397 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 SIM2Q14190 667 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 DMC1Q14565 340 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 LPAL2Q16609 132 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 GRAMD4Q6IC98 578 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 Q6ZNB5 142 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CEP68Q76N32 757 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 SYT13Q7L8C5 426 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 BHLHA9Q7RTU4 235 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 IRF2BP2Q7Z5L9 587 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 TMTC1Q8IUR5 882 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 SCUBE3Q8IX30 993 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CAMKK1Q8N5S9 505 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 RUBCNQ92622 972 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 BAG1Q99933 345 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 KCNF1Q9H3M0 494 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 SFMBT1Q9UHJ3 866 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 CFAP54Q96N23 3096 aa15.11■□□□□ 0.01
COMMD4-225ENST00000569245 PTPRZ1P23471 2315 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
COMMD4-225ENST00000569245 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 RIF1Q5UIP0 2472 aaKnown RBP15.1■□□□□ 0.01
COMMD4-225ENST00000569245 HRO43593 1189 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 GABBR2O75899 941 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 KLF8O95600 359 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-225ENST00000569245 APBB3O95704 486 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 CHKAP35790 457 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 GPD2P43304 727 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 ACADSBP45954 432 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 MRPS21P82921 87 aaKnown RBP15.1■□□□□ 0.01
COMMD4-225ENST00000569245 PTK2Q05397 1052 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 SRSF5Q13243 272 aaKnown RBP15.1■□□□□ 0.01
COMMD4-225ENST00000569245 ASIC2Q16515 512 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 C10orf76Q5T2E6 689 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-225ENST00000569245 WDR5BQ86VZ2 330 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 ETFBKMTQ8IXQ9 262 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 SCML4Q8N228 414 aa15.1■□□□□ 0.01
COMMD4-225ENST00000569245 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms