RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 CD72P21854 359 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 BSPRYQ5W0U4 402 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 GPR161Q8N6U8 529 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 CLEC4CQ8WTT0 213 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 MSANTD3Q96H12 275 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 DDX23Q9BUQ8 820 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 C8orf33Q9H7E9 229 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 E2F8A0AVK6 867 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 E5RJQ4 531 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SCAMP3O14828 347 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SART1O43290 800 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 IRF1P10914 325 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 ARSAP15289 507 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SOX9P48436 509 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 EML3Q32P44 896 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 NOP9Q86U38 636 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 RALGPS2Q86X27 583 aaPredicted RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 C1orf131Q8NDD1 294 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 EPS8L1Q8TE68 723 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 EDEM1Q92611 657 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 NELL2Q99435 816 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 FOXQ1Q9C009 403 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 OLA1Q9NTK5 396 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 F5P12259 2224 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 MOCS3O95396 460 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 NFATC1O95644 943 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 LTFP02788 710 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 PRLRP16471 622 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 AVPR2P30518 371 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 CTHP32929 405 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 VCPP55072 806 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SNX16P57768 344 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 COG7P83436 770 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 PJA1Q8NG27 643 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 DDX1Q92499 740 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 FAM3CQ92520 227 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 SYNCQ9H7C4 482 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 LTB4R2Q9NPC1 389 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 LSM7Q9UK45 103 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
NSMCE1-214ENST00000569236 MIA3Q5JRA6 1907 aa13.08□□□□□ -0.31
NSMCE1-214ENST00000569236 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 FAM170BA6NMN3 283 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 NR1H3Q13133 447 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 IPO4Q8TEX9 1081 aaKnown RBP13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 FAM149B1Q96BN6 582 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 OTUB2Q96DC9 234 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 SYT11Q9BT88 431 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 NDRG2Q9UN36 371 aaKnown RBP13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
NSMCE1-214ENST00000569236 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 NCAM2O15394 837 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 PI15O43692 258 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 LSM8O95777 96 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 MMEP08473 750 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 CDR2Q01850 454 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 ALKBH5Q6P6C2 394 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 HTR3DQ70Z44 454 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
NSMCE1-214ENST00000569236 WBP2Q969T9 261 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms