RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 SLC4A1P02730 911 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP1A1P04798 512 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RPL22P35268 128 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 GNL1P36915 607 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MMP13P45452 471 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CASP7P55210 303 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ITGA1P56199 1179 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF280AP59817 542 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PPIDQ08752 370 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CDH17Q12864 832 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LRRC36Q1X8D7 754 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RFX8Q6ZV50 586 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KRT73Q86Y46 540 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CCDC60Q8IWA6 550 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ACTL9Q8TC94 416 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CASP10Q92851 521 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ART4Q93070 314 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MAGEB10Q96LZ2 347 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CDK5RAP1Q96SZ6 601 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 APOL4Q9BPW4 351 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 C17orf80Q9BSJ5 609 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SPATA16Q9BXB7 569 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MROH8Q9H579 483 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 IMPAD1Q9NX62 359 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CD274Q9NZQ7 290 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CROTQ9UKG9 612 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SESN1Q9Y6P5 492 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ASTN2O75129 1339 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SUPT3HB4E1H0 165 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DDX3XO00571 662 aaKnown RBP eCLIP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TRAFD1O14545 582 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 FKBP9O95302 570 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CRTAMO95727 393 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HMGCRP04035 888 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP1A2P05177 515 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MSH3P20585 1137 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP3A7P24462 503 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 NPTX2P47972 431 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ALDH5A1P51649 535 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ACVR2BQ13705 512 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 GTF2H3Q13889 308 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PCBP1Q15365 356 aaKnown RBP eCLIP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 OASLQ15646 514 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DGUOKQ16854 277 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 GOLGA7BQ2TAP0 167 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DACT2Q5SW24 774 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DEPDC1Q5TB30 811 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DUPD1Q68J44 220 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 FKBP9P1Q75LS8 142 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LPCAT2Q7L5N7 544 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 EEPD1Q7L9B9 569 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SLFN11Q7Z7L1 901 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LRRC49Q8IUZ0 686 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 C12orf56Q8IXR9 622 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DNERQ8NFT8 737 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TCP10LQ8TDR4 215 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC5A5Q92911 643 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HES6Q96HZ4 224 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TMEM237Q96Q45 408 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 GPAMQ9HCL2 828 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TRMT6Q9UJA5 497 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TMX2Q9Y320 296 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 USP54Q70EL1 1684 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 A0A087X1B8 175 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 CARNS1A5YM72 827 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SNAP23O00161 211 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 XPO1O14980 1071 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SUPT20HL2P0C7V6 817 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 RARAP10276 462 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 ADSLP30566 484 aaPredicted RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 RRM2P31350 389 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC1A6P48664 564 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 WASHC5Q12768 1159 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 AUHQ13825 339 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 C1DQ13901 141 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 TTMPQ5BVD1 217 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 TTC23Q5W5X9 447 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM45BPQ6NSW5 357 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SV2AQ7L0J3 742 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP4Z1Q86W10 505 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 DHFR2Q86XF0 187 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 TDRD5Q8NAT2 981 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 PCSK9Q8NBP7 692 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 PNMA5Q96PV4 448 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 MTMR9Q96QG7 549 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 MRPS26Q9BYN8 205 aaKnown RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SIK2Q9H0K1 926 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 RAD21L1Q9H4I0 556 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 NMRAL1Q9HBL8 299 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 OSGEPQ9NPF4 335 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 ETAA1Q9NY74 926 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 USE1Q9NZ43 259 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms