RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TTC17Q96AE7 1141 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CREBZFQ9NS37 354 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 ARL8BQ9NVJ2 186 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 STOML1Q9UBI4 398 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 GTF2IRD1Q9UHL9 959 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SUFUQ9UMX1 484 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 I3L4J1 428 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 BIRC5O15392 142 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SEPT4O43236 478 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 AOC2O75106 756 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 GCATO75600 419 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 NEFHP12036 1026 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CNTFP26441 200 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SERPINB3P29508 390 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SCNN1AP37088 669 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 NR2C2P49116 596 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 ZBTB16Q05516 673 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 HIC1Q14526 733 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 C15orf59Q2T9L4 293 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 C1orf228Q6PIY5 440 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 ARCQ7LC44 396 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 PRPF39Q86UA1 669 aaKnown RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 ARHGAP24Q8N264 748 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 NME8Q8N427 588 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 PCDH19Q8TAB3 1148 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 OXNAD1Q96HP4 312 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 C12orf65Q9H3J6 166 aaKnown RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SIRPGQ9P1W8 387 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 RALGAPA2Q2PPJ7 1873 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 C17orf102A2RUQ5 167 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 GYG2O15488 501 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 CAPN15O75808 1086 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 ACADSP16219 412 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 ATP6V1C1P21283 382 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 RBL1P28749 1068 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 SDC4P31431 198 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 NRLP54845 237 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 SLC6A3Q01959 620 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 PRKCZQ05513 592 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 KIZQ2M2Z5 673 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 DCAF4L1Q3SXM0 396 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 STXBP5Q5T5C0 1151 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 TIFABQ6ZNK6 161 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 APBB1IPQ7Z5R6 666 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-213ENST00000566756 PPM1NQ8N819 430 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 CFAP36Q96G28 342 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-213ENST00000566756 PRDM16Q9HAZ2 1276 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 XAB2Q9HCS7 855 aaKnown RBP17.34■□□□□ 0.37
CMTM3-213ENST00000566756 DPP3Q9NY33 737 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 CORO1CQ9ULV4 474 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-213ENST00000566756 DERAQ9Y315 318 aa17.34■□□□□ 0.37
CMTM3-213ENST00000566756 FAM159BA6NKW6 160 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 RFPL1O75677 317 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.37
CMTM3-213ENST00000566756 PTPN9P43378 593 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 TBCCQ15814 346 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 TSNAXIP1Q2TAA8 658 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 GSDMBQ8TAX9 411 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 SIKE1Q9BRV8 207 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 MTG1Q9BT17 334 aaPredicted RBP17.33■□□□□ 0.37
CMTM3-213ENST00000566756 SNRNP25Q9BV90 132 aaKnown RBP17.33■□□□□ 0.37
CMTM3-213ENST00000566756 PLAC1Q9HBJ0 212 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 SPC25Q9HBM1 224 aa17.33■□□□□ 0.37
CMTM3-213ENST00000566756 TRIP11Q15643 1979 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 A8MXQ7 604 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 TREHO43280 583 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 AVILO75366 819 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 SMNDC1O75940 238 aaKnown RBP eCLIP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 RARBP10826 455 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 MYL2P10916 166 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 ESRRAP11474 423 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 DARSP14868 501 aaKnown RBP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 AXLP30530 894 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 CRHR1P34998 444 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 DPYSL2Q16555 572 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 GOLGA7BQ2TAP0 167 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 APLFQ8IW19 511 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 FAM172AQ8WUF8 416 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 E2F7Q96AV8 911 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 ACAP3Q96P50 834 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 EBNA1BP2Q99848 306 aaKnown RBP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 NRDE2Q9H7Z3 1164 aa17.33■□□□□ 0.36
CMTM3-213ENST00000566756 ALG13Q9NP73 1137 aaKnown RBP17.33■□□□□ 0.36
CMTM3-213ENST00000566756 FCHO1O14526 889 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 ENTPD5O75356 428 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 HOXA11P31270 313 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-213ENST00000566756 GRM5P41594 1212 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 PTDSS1P48651 473 aaKnown RBP17.32■□□□□ 0.36
CMTM3-213ENST00000566756 OCRLQ01968 901 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 MTM1Q13496 603 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 GNASQ5JWF2 1037 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 SLC35F5Q8WV83 523 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 DNAJB3Q8WWF6 145 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms