RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 OTOP2Q7RTS6 562 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 RNF139Q8WU17 664 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 RSAD2Q8WXG1 361 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 IRGQQ8WZA9 623 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 PGAP3Q96FM1 320 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 TMEM175Q9BSA9 504 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 TTPALQ9BTX7 342 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 ACBD3Q9H3P7 528 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 ARHGEF4Q9NR80 690 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 MTRF1LQ9UGC7 380 aaKnown RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 NUP205Q92621 2012 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 TCRBV7S3A2A0A539 114 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA8MH3BSY2 632 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 H7C0C1 242 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 ATP5OP48047 213 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 GPS2Q13227 327 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 EIF4EBP2Q13542 120 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 ANKRD22Q5VYY1 191 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 CASP10Q92851 521 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 ZNF689Q96CS4 500 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 FUBP3Q96I24 572 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 WDCPQ9H6R7 721 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 PCDH9Q9HC56 1237 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 DTLQ9NZJ0 730 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 REV3LO60673 3130 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 PTPRSQ13332 1948 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 WDR27A2RRH5 827 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 RAG1P15918 1043 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 ROR1Q01973 937 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 ZNF844Q08AG5 666 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 GPR17Q13304 367 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 CEP85LQ5SZL2 805 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 KCNT2Q6UVM3 1135 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 NUP93Q8N1F7 819 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 SH2D3CQ8N5H7 860 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 IGSF21Q96ID5 467 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 PABPC3Q9H361 631 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 CDC42EP4Q9H3Q1 356 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 KCNN4O15554 427 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 MFSD11O43934 449 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 BANF1O75531 89 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 TBX18O95935 607 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 IGLV3-25P01717 112 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 RARGP13631 454 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 TGM2P21980 687 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 GBP1P32455 592 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 ARL4AP40617 200 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 CXCR3P49682 368 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 SEMA3BQ13214 749 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 EFHC2Q5JST6 749 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 SPOUT1Q5T280 376 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 RNASEH2BQ5TBB1 312 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 VSTM1Q6UX27 236 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 NECAB2Q7Z6G3 386 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 VSIG1Q86XK7 387 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 SCML4Q8N228 414 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 CPT1BQ92523 772 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 LGMNQ99538 433 aa11.76□□□□□ -0.53
LINC00562-201ENST00000566385 RC3H2Q9HBD1 1191 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 XPO7Q9UIA9 1087 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 TPX2Q9ULW0 747 aaKnown RBP11.76□□□□□ -0.53
LINC00562-201ENST00000566385 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 RIPK2O43353 540 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ACSL3O95573 720 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 OR1D2P34982 312 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 FASTKD3Q14CZ7 662 aaKnown RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 KYNUQ16719 465 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 GIPC2Q8TF65 315 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 C8orf48Q96LL4 319 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 SLC9A7Q96T83 725 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 FRMD8P1Q9BZ68 369 aaPredicted RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ABCC13Q9NSE7 274 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 SZT2Q5T011 3432 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ZNF487B1APH4 448 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 EEF2KO00418 725 aaKnown RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ATF6P18850 670 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 PPARDQ03181 441 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms