RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CYP2U1Q7Z449 544 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 MIB1Q86YT6 1006 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 IPO4Q8TEX9 1081 aaKnown RBP15.88■□□□□ 0.13
CMTM3-212ENST00000566121 STK32AQ8WU08 396 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 ULBP1Q9BZM6 244 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 LNP1A1A4G5 178 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 FBXO21O94952 628 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 FGFR1OPO95684 399 aaKnown RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 CYBBP04839 570 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 CSRP1P21291 193 aaKnown RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 HARS2P49590 506 aaKnown RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 DAOAP59103 153 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 RING1Q06587 406 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 NNTQ13423 1086 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 GOLGA7BQ2TAP0 167 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 MPPE1Q53F39 396 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 ADGRF1Q5T601 910 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 EGFLAMQ63HQ2 1017 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 TOGARAM2Q6ZUX3 1019 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 RSRC2Q7L4I2 434 aaKnown RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 ENOSF1Q7L5Y1 443 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 KIAA0907Q7Z7F0 614 aaPredicted RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 CHPFQ8IZ52 775 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 ZNF557Q8N988 423 aaPredicted RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 UCMAQ8WVF2 138 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 HMGB4Q8WW32 186 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 P2RY11Q96G91 374 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 ZNF419Q96HQ0 510 aaPredicted RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 IPO9Q96P70 1041 aaKnown RBP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 BCCIPQ9P287 314 aaKnown RBP eCLIP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 PILRBQ9UKJ0 227 aa15.87■□□□□ 0.13
CMTM3-212ENST00000566121 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.87■□□□□ 0.13
CMTM3-212ENST00000566121 PCNX2A6NKB5 2137 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 TULP2O00295 520 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 CDX4O14627 284 aaPredicted RBP15.86■□□□□ 0.13
CMTM3-212ENST00000566121 IRAK2O43187 625 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 MAP3K13O43283 966 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 IGLV3-19P01714 112 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 IGLV3-27P01718 113 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 KCNH2Q12809 1159 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 TMEM270Q6UE05 265 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 SIX6OS1Q8N1H7 587 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 RNF139Q8WU17 664 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 NELFBQ8WX92 580 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 ERCC4Q92889 916 aaPredicted RBP15.86■□□□□ 0.13
CMTM3-212ENST00000566121 EDEM2Q9BV94 578 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 ELOVL2Q9NXB9 296 aa15.86■□□□□ 0.13
CMTM3-212ENST00000566121 MAP1BP46821 2468 aaKnown RBP15.85■□□□□ 0.13
CMTM3-212ENST00000566121 IGHV1OR15-9A0A0B4J2B8 117 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 SLC12A8A0AV02 714 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 YJEFN3A6XGL0 299 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 E7ENQ6 273 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 SART1O43290 800 aaKnown RBP15.85■□□□□ 0.13
CMTM3-212ENST00000566121 KCNK5O95279 499 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 CD19P15391 556 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 PMLP29590 882 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 ADIGQ0VDE8 80 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 CCDC6Q16204 474 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 CCDC40Q4G0X9 1142 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 LYSMD4Q5XG99 296 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 PMF1Q6P1K2 205 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 ANKS1BQ7Z6G8 1248 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 DENND1CQ8IV53 801 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 FMNL3Q8IVF7 1028 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 UNC45BQ8IWX7 931 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 WFIKKN2Q8TEU8 576 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 TFAP2BQ92481 460 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 FOXJ1Q92949 421 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 MRGPRX1Q96LB2 322 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 ACOX2Q99424 681 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 NUSAP1Q9BXS6 441 aaKnown RBP15.85■□□□□ 0.13
CMTM3-212ENST00000566121 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 ITM2CQ9NQX7 267 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 USP24Q9UPU5 2620 aa15.85■□□□□ 0.13
CMTM3-212ENST00000566121 ASCC3Q8N3C0 2202 aaKnown RBP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 RNF225M0QZC1 329 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 GABBR2O75899 941 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 AFPP02771 609 aaKnown RBP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 CEACAM1P13688 526 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 NDUFV2P19404 249 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 OXTRP30559 389 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PTGER3P43115 390 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 ACADSBP45954 432 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 DHPSP49366 369 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 IRX4P78413 519 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PAK1Q13153 545 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 STARD3Q14849 445 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 DUOXA1Q1HG43 343 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 NUGGCQ68CJ6 796 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PPM1KQ8N3J5 372 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 CADM4Q8NFZ8 388 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 ZSWIM1Q9BR11 485 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 TRIM62Q9BVG3 475 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PCED1AQ9H1Q7 454 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms