RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TRIM36Q9NQ86 728 aa5.13□□□□□ -1.59
CHD9-215ENST00000565442 PRDM8Q9NQV8 689 aa5.13□□□□□ -1.59
CHD9-215ENST00000565442 DUSP22Q9NRW4 184 aa5.13□□□□□ -1.59
CHD9-215ENST00000565442 ASB6Q9NWX5 421 aa5.13□□□□□ -1.59
CHD9-215ENST00000565442 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
CHD9-215ENST00000565442 WIPF3A6NGB9 483 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 A8MVJ9 347 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 H0YIZ8 118 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 M0R3H8 397 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 QSOX1O00391 747 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 PPP6R2O75170 966 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 RPP40O75818 363 aaKnown RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 PDE8BO95263 885 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 DLDP09622 509 aaKnown RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 MCM5P33992 734 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 GSTM5P46439 218 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 POLE2P56282 527 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 PPFIA1Q13136 1202 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 AASDHQ4L235 1098 aaPredicted RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 RRAGAQ7L523 313 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 SLC44A2Q8IWA5 706 aaPredicted RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 RP9Q8TA86 221 aaKnown RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 PRR11Q96HE9 360 aaPredicted RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 LENG8Q96PV6 779 aaPredicted RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 EIF3CQ99613 913 aaKnown RBP5.12□□□□□ -1.59
CHD9-215ENST00000565442 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 MGAT4CQ9UBM8 478 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 AMFRQ9UKV5 643 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 DAPP1Q9UN19 280 aa5.12□□□□□ -1.59
CHD9-215ENST00000565442 CCDC151A5D8V7 595 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 KIF28PB7ZC32 967 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ORC4O43929 436 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 NPSP0C0P6 89 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 FAM163BP0C2L3 166 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ALADP13716 330 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 FPR3P25089 353 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ITPKBP27987 946 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 CCT5P48643 541 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 CCT8P50990 548 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PRKAA2P54646 552 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ARL4CP56559 192 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 EEFSECP57772 596 aaKnown RBP5.11□□□□□ -1.59
CHD9-215ENST00000565442 PSG6Q00889 435 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 SEMA3BQ13214 749 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 AKNAD1Q5T1N1 836 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A2PQ658T7 463 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 CCDC144NLQ6NUI1 221 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PTCHD4Q6ZW05 846 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PTF1AQ7RTS3 328 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 WDR53Q7Z5U6 358 aaPredicted RBP5.11□□□□□ -1.59
CHD9-215ENST00000565442 MOGAT3Q86VF5 341 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ABHD11Q8NFV4 315 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 SLC22A17Q8WUG5 538 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 RILPL2Q969X0 211 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 TAF1DQ9H5J8 278 aaPredicted RBP5.11□□□□□ -1.59
CHD9-215ENST00000565442 ELAC1Q9H777 363 aaKnown RBP5.11□□□□□ -1.59
CHD9-215ENST00000565442 IL17RBQ9NRM6 502 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 ADAMTS5Q9UNA0 930 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PCDHB7Q9Y5E2 793 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 PCDHB2Q9Y5E7 798 aa5.11□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A18PA6NE21 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A16PA6NEW6 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A9PA6NNJ1 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A5PA8MXJ8 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 IRAK2O43187 625 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CTIFO43310 598 aaKnown RBP5.1□□□□□ -1.59
CHD9-215ENST00000565442 TMPRSS11DO60235 418 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FGAP02671 866 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A15PP0C7V4 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FAM90A14PP0C7W9 464 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 HSD3B1P14060 373 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 ADRA1DP25100 572 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CST5P28325 142 aaPredicted RBP5.1□□□□□ -1.59
CHD9-215ENST00000565442 MAPK9P45984 424 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 DIO1P49895 249 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 DGKQP52824 942 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CUL4BQ13620 913 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 KCNJ12Q14500 433 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 RPS6KA2Q15349 733 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 TBC1D25Q3MII6 688 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 KIAA1614Q5VZ46 1190 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 NFRKBQ6P4R8 1299 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 ANKRD16Q6P6B7 361 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 RFX8Q6ZV50 586 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 RAB11FIP2Q7L804 512 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 KRT27Q7Z3Y8 459 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CLASRPQ8N2M8 674 aaKnown RBP5.1□□□□□ -1.59
CHD9-215ENST00000565442 CSGALNACT1Q8TDX6 532 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 RSC1A1Q92681 617 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 C3orf49Q96BT1 292 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 EVI5LQ96CN4 794 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 GCC1Q96CN9 775 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 UROC1Q96N76 676 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 TRAPPC9Q96Q05 1148 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 DDX23Q9BUQ8 820 aaKnown RBP5.1□□□□□ -1.59
CHD9-215ENST00000565442 MECRQ9BV79 373 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 FSD1LQ9BXM9 530 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 VPS16Q9H269 839 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CCDC134Q9H6E4 229 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms