RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 USP50Q70EL3 339 aaPredicted RBP23.1■■□□□ 1.29
SPSB3-206ENST00000564709 APBB1IPQ7Z5R6 666 aaPredicted RBP23.1■■□□□ 1.29
SPSB3-206ENST00000564709 FAM149B1Q96BN6 582 aa23.1■■□□□ 1.29
SPSB3-206ENST00000564709 MYCBPQ99417 103 aaPredicted RBP23.1■■□□□ 1.29
SPSB3-206ENST00000564709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.1■■□□□ 1.29
SPSB3-206ENST00000564709 UBQLN1Q9UMX0 589 aaKnown RBP23.1■■□□□ 1.29
SPSB3-206ENST00000564709 PLLPQ9Y342 182 aa23.1■■□□□ 1.29
SPSB3-206ENST00000564709 TRIP12Q14669 1992 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-206ENST00000564709 HMX2A2RU54 273 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 PEX11AO75192 247 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 SULT1E1P49888 294 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CDK16Q00536 496 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 SOX4Q06945 474 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-206ENST00000564709 HIC1Q14526 733 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 PRAMEF19Q5SWL8 479 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 DEPDC1BQ8WUY9 529 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 SKA1Q96BD8 255 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 SAR1AQ9NR31 198 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CCL15-CCL14A0A0B4J2E2 113 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 SMIM28A0A1B0GU29 152 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 DYNC1LI2O43237 492 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-206ENST00000564709 MFSD11O43934 449 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CYP2C9P11712 490 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 HOXD8P13378 290 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-206ENST00000564709 TPSB2P20231 275 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 ADIGQ0VDE8 80 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CBLBQ13191 982 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 TPSAB1Q15661 275 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CCL15Q16663 113 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 CASC4Q6P4E1 433 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 DEFB106AQ8N104 65 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 TTC8Q8TAM2 541 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 DNAJB3Q8WWF6 145 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 LRRC39Q96DD0 335 aa23.09■■□□□ 1.29
SPSB3-206ENST00000564709 WDR27A2RRH5 827 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 FAM159BA6NKW6 160 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 ZNF487B1APH4 448 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 PIRO00625 290 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 DARSP14868 501 aaKnown RBP23.08■■□□□ 1.29
SPSB3-206ENST00000564709 ZFXP17010 805 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-206ENST00000564709 BST1Q10588 318 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 SPDYAQ5MJ70 313 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 LGSNQ5TDP6 509 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-206ENST00000564709 KIRREL3Q8IZU9 778 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 GTF3C2Q8WUA4 911 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-206ENST00000564709 TFB1MQ8WVM0 346 aaKnown RBP23.08■■□□□ 1.29
SPSB3-206ENST00000564709 HTR3CQ8WXA8 447 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 TINF2Q9BSI4 451 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 LNPEPQ9UIQ6 1025 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 PCDHA11Q9Y5I1 949 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 USP3Q9Y6I4 520 aa23.08■■□□□ 1.29
SPSB3-206ENST00000564709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.08■■□□□ 1.28
SPSB3-206ENST00000564709 CLDN5O00501 218 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 TRAFD1O14545 582 aaPredicted RBP23.08■■□□□ 1.28
SPSB3-206ENST00000564709 STRNO43815 780 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 KRT38O76015 456 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 CCNFP41002 786 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 NR2C2P49116 596 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 TMPRSS15P98073 1019 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 CHI3L2Q15782 390 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 NBPF20Q3BBV1 942 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 ANKRD20A2Q5SQ80 823 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 ANKRD20A1Q5TYW2 823 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 ANKRD20A3Q5VUR7 823 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 RFWD3Q6PCD5 774 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 ALYREFQ86V81 257 aaKnown RBP23.08■■□□□ 1.28
SPSB3-206ENST00000564709 NDUFAF2Q8N183 169 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 CRYBG2Q8N1P7 616 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 NPLOC4Q8TAT6 608 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 OXNAD1Q96HP4 312 aaPredicted RBP23.08■■□□□ 1.28
SPSB3-206ENST00000564709 ZNF570Q96NI8 536 aa23.08■■□□□ 1.28
SPSB3-206ENST00000564709 MTO1Q9Y2Z2 717 aaKnown RBP23.08■■□□□ 1.28
SPSB3-206ENST00000564709 H0Y3Z8 333 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ENTPD5O75356 428 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 TGDSO95455 350 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ACAT1P24752 427 aaKnown RBP23.07■■□□□ 1.28
SPSB3-206ENST00000564709 IRX4P78413 519 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 SEMA5AQ13591 1074 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 BSPRYQ5W0U4 402 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 APPL2Q8NEU8 664 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 UPF1Q92900 1129 aaKnown RBP eCLIP23.07■■□□□ 1.28
SPSB3-206ENST00000564709 PTCD3Q96EY7 689 aaKnown RBP23.07■■□□□ 1.28
SPSB3-206ENST00000564709 MS4A4AQ96JQ5 239 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 CXorf56Q9H5V9 222 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 DENND2DQ9H6A0 471 aaPredicted RBP23.07■■□□□ 1.28
SPSB3-206ENST00000564709 SEPT10Q9P0V9 454 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ARMCX1Q9P291 453 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 MARCOQ9UEW3 520 aaPredicted RBP23.07■■□□□ 1.28
SPSB3-206ENST00000564709 RRN3P2A6NIE6 340 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 KITP10721 976 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ARL4AP40617 200 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 DCAF6Q58WW2 860 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 PIGZQ86VD9 579 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 OSTM1Q86WC4 334 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ADGRF2Q8IZF7 708 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 BRI3BPQ8WY22 251 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 OLFM3Q96PB7 478 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ABHD16BQ9H3Z7 469 aa23.07■■□□□ 1.28
SPSB3-206ENST00000564709 ARHGEF4Q9NR80 690 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms