RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 LCLAT1Q6UWP7 414 aa19.85■□□□□ 0.77
NME3-207ENST00000564628 SHC3Q92529 594 aa19.85■□□□□ 0.77
NME3-207ENST00000564628 NAT10Q9H0A0 1025 aaKnown RBP19.85■□□□□ 0.77
NME3-207ENST00000564628 GMIPQ9P107 970 aa19.85■□□□□ 0.77
NME3-207ENST00000564628 LIMA1Q9UHB6 759 aaKnown RBP19.85■□□□□ 0.77
NME3-207ENST00000564628 MBD1Q9UIS9 605 aaPredicted RBP19.85■□□□□ 0.77
NME3-207ENST00000564628 AJAP1Q9UKB5 411 aaPredicted RBP19.85■□□□□ 0.77
NME3-207ENST00000564628 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.85■□□□□ 0.77
NME3-207ENST00000564628 SCML2Q9UQR0 700 aa19.85■□□□□ 0.77
NME3-207ENST00000564628 FAM208BQ5VWN6 2430 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 BECN2A8MW95 431 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 SCAMP3O14828 347 aaKnown RBP19.84■□□□□ 0.77
NME3-207ENST00000564628 COCHO43405 550 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 PGFP49763 221 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 KDSRQ06136 332 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 STILQ15468 1287 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 CNGA2Q16280 664 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 UAP1L1Q3KQV9 507 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 RAB41Q5JT25 222 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 LY6G5CQ5SRR4 150 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 LYSMD4Q5XG99 296 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 APTXQ7Z2E3 356 aaKnown RBP19.84■□□□□ 0.77
NME3-207ENST00000564628 TRMT11Q7Z4G4 463 aaKnown RBP19.84■□□□□ 0.77
NME3-207ENST00000564628 PIGZQ86VD9 579 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 ETFBKMTQ8IXQ9 262 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 TMEFF1Q8IYR6 380 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 AOPEPQ8N6M6 819 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 HMGB4Q8WW32 186 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 ZFRQ96KR1 1074 aaKnown RBP19.84■□□□□ 0.77
NME3-207ENST00000564628 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 SLC32A1Q9H598 525 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 TMEM74BQ9NUR3 256 aa19.84■□□□□ 0.77
NME3-207ENST00000564628 TCRBV21S2A2A0A5A6 115 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 LRRC10BA6NIK2 292 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 UPK3BL1B0FP48 263 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 UPK3BL2E5RIL1 263 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 XPO1O14980 1071 aaKnown RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 HOXC11O43248 304 aaPredicted RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 SETSIPP0DME0 302 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 ENGP17813 658 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 BRD2P25440 801 aaKnown RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 PDE4CQ08493 712 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 BST2Q10589 180 aaKnown RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 HECTD3Q5T447 861 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 BTBD8Q5XKL5 378 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 CCDC186Q7Z3E2 898 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 DHX40Q8IX18 779 aaKnown RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 FRMD1Q8N878 549 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 DEFB124Q8NES8 71 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 GATA6Q92908 595 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 SCNM1Q9BWG6 230 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 HESX1Q9UBX0 185 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 CHORDC1Q9UHD1 332 aaPredicted RBP19.83■□□□□ 0.77
NME3-207ENST00000564628 PILRBQ9UKJ0 227 aa19.83■□□□□ 0.77
NME3-207ENST00000564628 TBC1D3BA6NDS4 549 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 TULP2O00295 520 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 CYP26A1O43174 497 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 CALCAP01258 141 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 KRT5P13647 590 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 SPINK2P20155 84 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 PLA2G4AP47712 749 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 COPB1P53618 953 aaKnown RBP19.82■□□□□ 0.76
NME3-207ENST00000564628 SLC8A3P57103 927 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 MEA1Q16626 185 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 NUDT18Q6ZVK8 323 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 ARMCX6Q7L4S7 300 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 PGBD3Q8N328 593 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 VPS16Q9H269 839 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 CYLDQ9NQC7 956 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 DEC1Q9P2X7 70 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 DNAJC12Q9UKB3 198 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 SH3BP1Q9Y3L3 701 aa19.82■□□□□ 0.76
NME3-207ENST00000564628 AP5Z1O43299 807 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 TULP3O75386 442 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 TOP3BO95985 862 aaKnown RBP19.81■□□□□ 0.76
NME3-207ENST00000564628 MAPK8P45983 427 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 ARHGAP44Q17R89 818 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 KLHDC7AQ5VTJ3 777 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 SLC36A4Q6YBV0 504 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 PIP4P1Q86T03 277 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 ZNF276Q8N554 614 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 ZNF513Q8N8E2 541 aaPredicted RBP19.81■□□□□ 0.76
NME3-207ENST00000564628 CEP76Q8TAP6 659 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 SLC35F5Q8WV83 523 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 KCTD13Q8WZ19 329 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 NAA15Q9BXJ9 866 aaKnown RBP19.81■□□□□ 0.76
NME3-207ENST00000564628 NMUR1Q9HB89 426 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 PLCB1Q9NQ66 1216 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 TLR8Q9NR97 1041 aaKnown RBP19.81■□□□□ 0.76
NME3-207ENST00000564628 SPHK2Q9NRA0 654 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 RALYQ9UKM9 306 aaKnown RBP19.81■□□□□ 0.76
NME3-207ENST00000564628 STARD13Q9Y3M8 1113 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 NEUROG3Q9Y4Z2 214 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 IGF2RP11717 2491 aa19.81■□□□□ 0.76
NME3-207ENST00000564628 ZZEF1O43149 2961 aa19.8■□□□□ 0.76
NME3-207ENST00000564628 MYOFQ9NZM1 2061 aa19.8■□□□□ 0.76
NME3-207ENST00000564628 LGALS16A8MUM7 142 aa19.8■□□□□ 0.76
NME3-207ENST00000564628 PES1O00541 588 aaKnown RBP19.8■□□□□ 0.76
NME3-207ENST00000564628 ATP1A3P13637 1013 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms