RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TMPRSS6Q8IU80 811 aa10.79□□□□□ -0.68
RNF40-204ENST00000563683 PIP4K2CQ8TBX8 421 aa10.79□□□□□ -0.68
RNF40-204ENST00000563683 ADAM32Q8TC27 787 aa10.79□□□□□ -0.68
RNF40-204ENST00000563683 KRT82Q9NSB4 513 aa10.79□□□□□ -0.68
RNF40-204ENST00000563683 TAS2R1Q9NYW7 299 aa10.79□□□□□ -0.68
RNF40-204ENST00000563683 CD48P09326 243 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ADORA2AP29274 412 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ATICP31939 592 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 LSAMPQ13449 338 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ART3Q13508 389 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 LRRC38Q5VT99 294 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 TXNRD3NBQ6F5E7 133 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 CES3Q6UWW8 571 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 HDAC11Q96DB2 347 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 HAPLN3Q96S86 360 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 PLEKHA5Q9HAU0 1116 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 DDIT4Q9NX09 232 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 UBQLN1Q9UMX0 589 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 KCNK1O00180 336 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 LRCH4O75427 683 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 ANPEPP15144 967 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.685e-7■■■■□ 19.7
RNF40-204ENST00000563683 GRIK4Q16099 956 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ARMC3Q5W041 872 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ABI1Q8IZP0 508 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 GPC2Q8N158 579 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 OR6P1Q8NGX9 317 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 WDR60Q8WVS4 1066 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 CCDC68Q9H2F9 335 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 UBP1Q9NZI7 540 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ARMCX1Q9P291 453 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 DRG1Q9Y295 367 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 ZNF541Q9H0D2 1346 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 PABPN1LA6NDY0 278 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 SERPINB3P29508 390 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 CRADDP78560 199 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 PTP4A2Q12974 167 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 KCNT2Q6UVM3 1135 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 RINLQ6ZS11 566 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 PRPF39Q86UA1 669 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 RFWD2Q8NHY2 731 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 TJP2Q9UDY2 1190 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 ABT1Q9ULW3 272 aaKnown RBP10.78□□□□□ -0.68
RNF40-204ENST00000563683 TNFSF13BQ9Y275 285 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 AFG3L2Q9Y4W6 797 aa10.78□□□□□ -0.68
RNF40-204ENST00000563683 SMIM31A0A1B0GVY4 71 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 POLBP06746 335 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 CCDC130P13994 396 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 GCAP28676 217 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 NRLP54845 237 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 PDK1Q15118 436 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 TAF5Q15542 800 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 DNAL1Q4LDG9 190 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 FASTKD1Q53R41 847 aaKnown RBP10.77□□□□□ -0.68
RNF40-204ENST00000563683 MAP3K21Q5TCX8 1036 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 FAM183BPQ6ZVS7 135 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 BBS12Q6ZW61 710 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 DNAJB3Q8WWF6 145 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 FBXL18Q96ME1 805 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 TMEM120AQ9BXJ8 343 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 GTSE1Q9NYZ3 720 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 FETUBQ9UGM5 382 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.68
RNF40-204ENST00000563683 KPNA7A9QM74 516 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 CXCL11O14625 94 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 FKBP6O75344 327 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ARF4P18085 180 aaPredicted RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 CRABP2P29373 138 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ACADSBP45954 432 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ZCCHC23Q6ZST2 131 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 GLIS1Q8NBF1 620 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 SLC2A14Q8TDB8 520 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 PPWD1Q96BP3 646 aaKnown RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 B3GNT5Q9BYG0 378 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 FRMD8P1Q9BZ68 369 aaPredicted RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 XAB2Q9HCS7 855 aaKnown RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 COL4A1P02462 1669 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 IQCA1LA6NCM1 817 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 SOWAHBA6NEL2 793 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 GPR25O00155 361 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 NFKBIEO00221 500 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 PFDN1O60925 122 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 USP12O75317 370 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ERBB2P04626 1255 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ITGAVP06756 1048 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 SERPINB9P50453 376 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 AQP5P55064 265 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 MED21Q13503 144 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 TMEM192Q8IY95 271 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms