RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 UNC5AQ6ZN44 842 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 GSDMBQ8TAX9 411 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 CCDC110Q8TBZ0 833 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 SPATA13Q96N96 652 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 PAIP2Q9BPZ3 127 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 DHX35Q9H5Z1 703 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 SAR1AQ9NR31 198 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 SMYD2Q9NRG4 433 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 PCDHA11Q9Y5I1 949 aa10.26□□□□□ -0.77
PDXDC1-210ENST00000563679 TREHO43280 583 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 LPXNO60711 386 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 HNRNPCL1O60812 293 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 HUS1O60921 280 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 SNRPAP09012 282 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 VAV1P15498 845 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 NPR3P17342 541 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 ATXN1P54253 815 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 NAB1Q13506 487 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 DPYSQ14117 519 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 SETDB1Q15047 1291 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 STXBP5Q5T5C0 1151 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 PIGZQ86VD9 579 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 RAB3IL1Q8TBN0 382 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 NTAN1Q96AB6 310 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 PGAP3Q96FM1 320 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 TLE6Q9H808 572 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 MANSC1Q9H8J5 431 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 NOD2Q9HC29 1040 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 ARHGEF4Q9NR80 690 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 DOCK3Q8IZD9 2030 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 C17orf102A2RUQ5 167 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 OPHN1O60890 802 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 RFPL1O75677 317 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 KRT37O76014 449 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 PDGFRBP09619 1106 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 LCP1P13796 627 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 CNTFP26441 200 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 SERPINB9P50453 376 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 SEMA3BQ13214 749 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 FRG1Q14331 258 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 PPP6R3Q5H9R7 873 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 FYB2Q5VWT5 728 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 TBC1D1Q86TI0 1168 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 DEFB106AQ8N104 65 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 TAB3Q8N5C8 712 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 TFB1MQ8WVM0 346 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 HTR3CQ8WXA8 447 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 KLHL29Q96CT2 875 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 OXNAD1Q96HP4 312 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 LRRC37BQ96QE4 947 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 TACO1Q9BSH4 297 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 IKBKGQ9Y6K9 419 aa10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 FNDC1Q4ZHG4 1894 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 ZNF638Q14966 1978 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-210ENST00000563679 CXorf49A8MYA2 514 aaPredicted RBP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 FBXO21O94952 628 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 APRTP07741 180 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 T-ENOLP0DO92 83 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 GNAT1P11488 350 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PTPN1P18031 435 aaKnown RBP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 HCAR3P49019 387 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 NKX3-2P78367 333 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 SF3A3Q12874 501 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■■□ 19.7
PDXDC1-210ENST00000563679 CTC1Q2NKJ3 1217 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 NBPF20Q3BBV1 942 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 RAB41Q5JT25 222 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 LGSNQ5TDP6 509 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 TAF2Q6P1X5 1199 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 MARK2Q7KZI7 788 aaKnown RBP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 CCNJLQ8IV13 435 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 TMEM86AQ8N2M4 240 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PTPRN2Q92932 1015 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 GGT7Q9UJ14 662 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PLLPQ9Y342 182 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 HMX2A2RU54 273 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 H3BRJ5 948 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 DCLK1O15075 740 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 KRT16P08779 473 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 TROVE2P10155 538 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PYGBP11216 843 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 GOT1P17174 413 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 ARL4AP40617 200 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 MNAT1P51948 309 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 NIPAL4Q0D2K0 466 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 PRAMEF19Q5SWL8 479 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 LRRC8BQ6P9F7 803 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 CLEC20AQ6ZU45 233 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 SCML4Q8N228 414 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 ERP27Q96DN0 273 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 MRRFQ96E11 262 aaKnown RBP10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 CFAP36Q96G28 342 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 CD248Q9HCU0 757 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 SIRPGQ9P1W8 387 aa10.24□□□□□ -0.77
PDXDC1-210ENST00000563679 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
PDXDC1-210ENST00000563679 KPNA6O60684 536 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms