RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PTPDC1A2A3K4 754 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 TARM1B6A8C7 271 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 GOLGA6L19H0YKK7 550 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PIP5K1BO14986 540 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 METTL18O95568 372 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 MMP2P08253 660 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 UBTFL6P0CB48 400 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 NME1P15531 152 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 FGFR2P21802 821 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 GLRA2P23416 452 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PRRX1P54821 245 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ERVK-9P63128 1117 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 FMO1Q01740 532 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 GRIK3Q13003 919 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 RPS6KA2Q15349 733 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CCDC142Q17RM4 750 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 LEXMQ3ZCV2 418 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ANKRD40Q6AI12 368 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PTCRAQ6ISU1 281 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 KCNT2Q6UVM3 1135 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PHACTR4Q8IZ21 702 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 AGGF1Q8N302 714 aaeCLIP4.97□□□□□ -1.61
SMG1-207ENST00000563235 TCAIMQ8N3R3 496 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 POU5F2Q8N7G0 328 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 HIPK4Q8NE63 616 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SHCBP1Q8NEM2 672 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 LPCAT1Q8NF37 534 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 KLHDC4Q8TBB5 520 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SLC13A3Q8WWT9 602 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 RMDN1Q96DB5 314 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 MRPL38Q96DV4 380 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 SPATA13Q96N96 652 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 OSMRQ99650 979 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 THUMPD2Q9BTF0 503 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 BBS2Q9BXC9 721 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 POLR3BQ9NW08 1133 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 OGFRQ9NZT2 677 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 HSF4Q9ULV5 492 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 E9PCH4 1651 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SYCE3A1L190 88 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 HSBP1L1C9JCN9 74 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 H7C1W4 665 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 TGFB1I1O43294 461 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SULT1B1O43704 296 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 AKR7A3O95154 331 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 KCNK5O95279 499 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PDGFBP01127 241 aaPredicted RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 CLEC3BP05452 202 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SELPP16109 830 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 CTNNA2P26232 953 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 CCT6AP40227 531 aaKnown RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 HTRA4P83105 476 aaPredicted RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 ASPHQ12797 758 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 MORF4L2Q15014 288 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PTPAQ15257 358 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PCSK7Q16549 785 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SMTNL2Q2TAL5 461 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 TOR2AQ5JU69 321 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 COL13A1Q5TAT6 717 aaPredicted RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 ADALQ6DHV7 355 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 TMEM270Q6UE05 265 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 CRELD2Q6UXH1 353 aaPredicted RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 BTLAQ7Z6A9 289 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 ADCK1Q86TW2 530 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SPARTQ8N0X7 666 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SLC43A2Q8N370 569 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 STK35Q8TDR2 534 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 WHAMMQ8TF30 809 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PIBF1Q8WXW3 757 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 WNT8BQ93098 351 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SLC22A18Q96BI1 424 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 KCTD12Q96CX2 325 aaKnown RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 HDAC11Q96DB2 347 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 SGF29Q96ES7 293 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PERPQ96FX8 193 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 FAM20AQ96MK3 541 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 PTCHD1Q96NR3 888 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 LBHD1Q9BQE6 289 aaPredicted RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 SPATS2LQ9NUQ6 558 aaKnown RBP4.96□□□□□ -1.61
SMG1-207ENST00000563235 TSPYL4Q9UJ04 414 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 RGS12O14924 1447 aa4.96□□□□□ -1.61
SMG1-207ENST00000563235 COL16A1Q07092 1604 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 MFSD2BA6NFX1 497 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 B4E1Z4 1266 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 LMNAP02545 664 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 ODC1P11926 461 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NR2F2P24468 414 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ARL3P36405 182 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ARSDP51689 593 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 HIRAP54198 1017 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 ASIC1P78348 528 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NKX3-2P78367 333 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 GPS1Q13098 491 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 IRF3Q14653 427 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 HERC3Q15034 1050 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 TCP11X2Q5H9J9 407 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms