RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CACNA1DQ01668 2161 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CEP192Q8TEP8 1941 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ZNF638Q14966 1978 aaKnown RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 KIAA1549LQ6ZVL6 1849 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 METTL12A8MUP2 240 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 F8W735 103 aaPredicted RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 H0Y8X5 98 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 K7ENP7 123 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 K7ERI5 159 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 LEFTY2O00292 366 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 PDE2AO00408 941 aaPredicted RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 SLC9A3R1O14745 358 aaPredicted RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 PRPF3O43395 683 aaKnown RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 TNFRSF21O75509 655 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 TADA3O75528 432 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 LYPLA2O95372 231 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 NFICP08651 508 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ADH5P11766 374 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ACPPP15309 386 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 NAMPTP43490 491 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.5
HERC1-213ENST00000561359 GPR15P49685 360 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ACADVLP49748 655 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 BTBD8Q5XKL5 378 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 INO80CQ6PI98 192 aaPredicted RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 KDM7AQ6ZMT4 941 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 CCDC81Q6ZN84 652 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ACAD11Q709F0 780 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ADAT2Q7Z6V5 191 aaKnown RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 CHD1LQ86WJ1 897 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 GATAD2AQ86YP4 633 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 MIB1Q86YT6 1006 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 AGGF1Q8N302 714 aaeCLIP5.69□□□□□ -1.5
HERC1-213ENST00000561359 Q8N3U1 123 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 FAM26EQ8N5C1 309 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 NAT16Q8N8M0 369 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 FSIP1Q8NA03 581 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 GALNT11Q8NCW6 608 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 SPPL2BQ8TCT7 592 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 SNX29Q8TEQ0 813 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 C2orf15Q8WU43 125 aaKnown RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 HAS1Q92839 578 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 MEGF10Q96KG7 1140 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 IFT74Q96LB3 600 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 SLC26A6Q9BXS9 759 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ZCWPW1Q9H0M4 648 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 RPF1Q9H9Y2 349 aaKnown RBP5.69□□□□□ -1.5
HERC1-213ENST00000561359 DEC1Q9P2X7 70 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 PCDHA4Q9UN74 947 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 TNFSF13BQ9Y275 285 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 PCDHB6Q9Y5E3 794 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 RAD54BQ9Y620 910 aa5.69□□□□□ -1.5
HERC1-213ENST00000561359 ZFHX3Q15911 3703 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 TRIP11Q15643 1979 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 EREGO14944 169 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SLC27A2O14975 620 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SGSM2O43147 1006 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 FZD6O60353 706 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 CCNT1O60563 726 aaKnown RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 BAG4O95429 457 aaKnown RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 MPOP05164 745 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 ITGAVP06756 1048 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 MCF2P10911 925 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 EDN3P14138 238 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 TCF3P15923 654 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 ABCB4P21439 1286 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 EPHA1P21709 976 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 CHMLP26374 656 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 LRPAP1P30533 357 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 AFMP43652 599 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 PDE6CP51160 858 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 GABREP78334 506 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SPAG1Q07617 926 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SMARCB1Q12824 385 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 HDAC1Q13547 482 aaPredicted RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 DDR2Q16832 855 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 DUOXA2Q1HG44 320 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SGO2Q562F6 1265 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 LY6G5CQ5SRR4 150 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 RHBDF2Q6PJF5 856 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 LAYNQ6UX15 382 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 LRRTM3Q86VH5 581 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 METTL23Q86XA0 190 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 DCP1BQ8IZD4 617 aaKnown RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 LSMEM2Q8N112 164 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 THEM5Q8N1Q8 247 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SENP8Q96LD8 212 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 ACOX2Q99424 681 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 ACO2Q99798 780 aaKnown RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 HSD17B14Q9BPX1 270 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 SSBP4Q9BWG4 385 aaPredicted RBP5.68□□□□□ -1.5
HERC1-213ENST00000561359 POLD4Q9HCU8 107 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 THSD1Q9NS62 852 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 GCNT4Q9P109 453 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 FOXD3Q9UJU5 478 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms