RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CPVLQ9H3G5 476 aa4.28□□□□□ -1.72
HERC1-211ENST00000560983 C12orf65Q9H3J6 166 aaKnown RBP4.28□□□□□ -1.72
HERC1-211ENST00000560983 PRORYQ9H606 182 aa4.28□□□□□ -1.72
HERC1-211ENST00000560983 HECAQ9UBI9 543 aaPredicted RBP4.28□□□□□ -1.72
HERC1-211ENST00000560983 NDRG2Q9UN36 371 aaKnown RBP4.28□□□□□ -1.72
HERC1-211ENST00000560983 COQ6Q9Y2Z9 468 aa4.28□□□□□ -1.72
HERC1-211ENST00000560983 ZFHX3Q15911 3703 aa4.28□□□□□ -1.72
HERC1-211ENST00000560983 MYO5AQ9Y4I1 1855 aaKnown RBP4.28□□□□□ -1.72
HERC1-211ENST00000560983 KIAA1671Q9BY89 1806 aa4.28□□□□□ -1.72
HERC1-211ENST00000560983 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 DENND4AQ7Z401 1863 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 CCDC163A0A0D9SF12 145 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 GSTTP1A0A1W2PQM5 241 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TCRBV16S1A1N1A0A5B0 115 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 SLC12A8A0AV02 714 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 RRN3P2A6NIE6 340 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 H0Y626 953 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 RPP40O75818 363 aaKnown RBP4.27□□□□□ -1.73
HERC1-211ENST00000560983 TRIM16O95361 564 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 CAVIN2O95810 425 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 SNHG28P0DPA3 235 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 MARK3P27448 753 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TCF7P36402 384 aaPredicted RBP4.27□□□□□ -1.73
HERC1-211ENST00000560983 CCR10P46092 362 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 MEOX1P50221 254 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 MECP2P51608 486 aaKnown RBP4.27□□□□□ -1.73
HERC1-211ENST00000560983 STAT5BP51692 787 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 NTHL1P78549 312 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 SIM1P81133 766 aaPredicted RBP4.27□□□□□ -1.73
HERC1-211ENST00000560983 CFHR1Q03591 330 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ZNF543Q08ER8 600 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 NEDD9Q14511 834 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 GRM7Q14831 915 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 PLK5Q496M5 336 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 MTSS1LQ765P7 747 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 FAM228AQ86W67 206 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ECHDC2Q86YB7 292 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 LDLRAD3Q86YD5 345 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ZNF280BQ86YH2 543 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TMPRSS6Q8IU80 811 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 KIAA0319LQ8IZA0 1049 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ITFG1Q8TB96 612 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 HDAC7Q8WUI4 952 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TRAPPC12Q8WVT3 735 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 FAM3CQ92520 227 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 RABGGTAQ92696 567 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 LPPQ93052 612 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 PHKBQ93100 1093 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 DEPDC7Q96QD5 511 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 RPS6KC1Q96S38 1066 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 PCYT2Q99447 389 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 FOXB1Q99853 325 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 MRPL4Q9BYD3 311 aaKnown RBP4.27□□□□□ -1.73
HERC1-211ENST00000560983 TRIM8Q9BZR9 551 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 UBA5Q9GZZ9 404 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 NRDE2Q9H7Z3 1164 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TRIM39Q9HCM9 518 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 TMEM9BQ9NQ34 198 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 PAG1Q9NWQ8 432 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 SNTG2Q9NY99 539 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ERAP1Q9NZ08 941 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 DKK4Q9UBT3 224 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 NDOR1Q9UHB4 597 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
HERC1-211ENST00000560983 MYO9AB2RTY4 2548 aa4.27□□□□□ -1.73
HERC1-211ENST00000560983 ABCB11O95342 1321 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 CCDC171Q6TFL3 1326 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 CSMD1Q96PZ7 3565 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 A0A0U1RQF3 1178 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 SMIM35A0A1B0GVV1 85 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 BCLAF3A2AJT9 711 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 M0QZ92 97 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 TGM5O43548 720 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 ATP9AO75110 1047 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 GPR32O75388 356 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 ECI2O75521 394 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 PEX11BO96011 259 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 GLUD1P00367 558 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 C1RP00736 705 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 CFBP00751 764 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 TOP1P11387 765 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 ATP2B1P20020 1258 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 APEX1P27695 318 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 PXNP49023 591 aaPredicted RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 SLC11A1P49279 550 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 ADCY7P51828 1080 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 IRX4P78413 519 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 SEMA3BQ13214 749 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 RIN1Q13671 783 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 TUBA3CQ13748 450 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 PLCB4Q15147 1175 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 UAP1L1Q3KQV9 507 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 TANGO2Q6ICL3 276 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 CC2D1AQ6P1N0 951 aaPredicted RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 TUBA3EQ6PEY2 450 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 MTHFD1LQ6UB35 978 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 Q6ZPA2 131 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 Q6ZS52 159 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 GRASPQ7Z6J2 395 aaPredicted RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 OR14K1Q8NGZ2 314 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms