RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CRTAC1Q9NQ79 661 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 CHORDC1Q9UHD1 332 aaPredicted RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ITGA11Q9UKX5 1188 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 NCKAP1Q9Y2A7 1128 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 FLNCQ14315 2725 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 USP9YO00507 2555 aaPredicted RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ARID1BQ8NFD5 2236 aaPredicted RBP10.07□□□□□ -0.8
HERC1-210ENST00000560897 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
HERC1-210ENST00000560897 BSNQ9UPA5 3926 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 CYP26A1O43174 497 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 DTNBO60941 627 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 FAM13AO94988 1023 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 GJB6O95452 261 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 PDGFRBP09619 1106 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 ACO1P21399 889 aaKnown RBP10.07□□□□□ -0.8
HERC1-210ENST00000560897 MFAP3P55082 362 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 ZBTB16Q05516 673 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 SFSWAPQ12872 951 aaKnown RBP10.07□□□□□ -0.8
HERC1-210ENST00000560897 SHBQ15464 509 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 SOWAHAQ2M3V2 549 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 C1orf127Q8N9H9 656 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
HERC1-210ENST00000560897 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 ELOVL2Q9NXB9 296 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 SATB2Q9UPW6 733 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 ATP8B3O60423 1300 aa10.07□□□□□ -0.8
HERC1-210ENST00000560897 TLR5O60602 858 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 PFKFB2O60825 505 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 CYBBP04839 570 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 TMEM191BP0C7N4 346 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 FAM87AP0C7U9 286 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 LMO2P25791 158 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 BNIP3Q12983 259 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
HERC1-210ENST00000560897 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 LINC00303Q3SY05 128 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 FNDC3BQ53EP0 1204 aaKnown RBP10.06□□□□□ -0.8
HERC1-210ENST00000560897 TTC38Q5R3I4 469 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SFMBT2Q5VUG0 894 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SLC39A4Q6P5W5 647 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 IGF2-ASQ6U949 168 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SYT2Q8N9I0 419 aaPredicted RBP10.06□□□□□ -0.8
HERC1-210ENST00000560897 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 KCNN1Q92952 543 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 GTF3C6Q969F1 213 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 WBP2Q969T9 261 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SGF29Q96ES7 293 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SEMA3CQ99985 751 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 PARVGQ9HBI0 331 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 NOL7Q9UMY1 257 aaKnown RBP10.06□□□□□ -0.8
HERC1-210ENST00000560897 NBASA2RRP1 2371 aa10.06□□□□□ -0.8
HERC1-210ENST00000560897 ICE1Q9Y2F5 2266 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 LRRC72A6NJI9 287 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 TLR4O00206 839 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 TIMM44O43615 452 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 SIGLEC6O43699 453 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 OPA1O60313 960 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 MAGEC1O60732 1142 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 REC8O95072 547 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 WNT1P04628 370 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
HERC1-210ENST00000560897 IGHV4-34P06331 123 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ITGB6P18564 788 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 WARSP23381 471 aaKnown RBP10.05□□□□□ -0.8
HERC1-210ENST00000560897 RXRGP48443 463 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 TRAPPC10P48553 1259 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 CLN3Q13286 438 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ZNF211Q13398 564 aaPredicted RBP10.05□□□□□ -0.8
HERC1-210ENST00000560897 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
HERC1-210ENST00000560897 POSTNQ15063 836 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 SNX30Q5VWJ9 437 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 CDCP2Q5VXM1 449 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ORAI3Q9BRQ5 295 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 SLC25A18Q9H1K4 315 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ZHX3Q9H4I2 956 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ERVMER34-1Q9H9K5 563 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 FBXO10Q9UK96 956 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
HERC1-210ENST00000560897 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 CACNA1DQ01668 2161 aa10.05□□□□□ -0.8
HERC1-210ENST00000560897 NPHP3-ACAD11A0A0J9YXS1 232 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 SDC3O75056 442 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms