RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 DFNA5O60443 496 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 STC2O76061 302 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 SEMA4FO95754 770 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 KLKB1P03952 638 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 GAP43P17677 238 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 CD27P26842 260 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 ACTN2P35609 894 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 PLA2G4AP47712 749 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 RHDQ02161 417 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 INAVAQ3KP66 663 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 TBC1D25Q3MII6 688 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 WDR49Q8IV35 697 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 FUKQ8N0W3 1084 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 OR2T3Q8NH03 318 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 RASSF8Q8NHQ8 419 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 SAP25Q8TEE9 199 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 TSC1Q92574 1164 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 EPSTI1Q96J88 318 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 ZSCAN31Q96LW9 406 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 HNRNPABQ99729 332 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 MED10Q9BTT4 135 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 LHX5Q9H2C1 402 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 NMUR1Q9HB89 426 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 TLR8Q9NR97 1041 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 OLFML3Q9NRN5 406 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 RP1P56715 2156 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 COL12A1Q99715 3063 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 ATP8B3O60423 1300 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 FRMD3A2A2Y4 597 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 AP1G2O75843 785 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 FSBPO95073 299 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 WISP1O95388 367 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 WNT1P04628 370 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 TNNI1P19237 187 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 MYL6P60660 151 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 TNNC1P63316 161 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 PKDCCQ504Y2 493 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 ARHGAP40Q5TG30 622 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 GPRIN1Q7Z2K8 1008 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 ADAT2Q7Z6V5 191 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 CACTIN-AS1Q8N1I8 211 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 EID2Q8N6I1 236 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 TTC9Q92623 222 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 ELF4Q99607 663 aaPredicted RBP9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 ARID3AQ99856 593 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 BTBD1Q9H0C5 482 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 XYLT2Q9H1B5 865 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 FBXO44Q9H4M3 255 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 CPNE5Q9HCH3 593 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-217ENST00000560521 PIEZO2Q9H5I5 2752 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 A0A1W2PQH9 124 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 KIAA0391O15091 583 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 VILLO15195 856 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 CYP26A1O43174 497 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 IGHV4-34P06331 123 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ITGAVP06756 1048 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 RARGP13631 454 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 KRT10P13645 584 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 C6P13671 934 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 CCDC130P13994 396 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 HOXD13P35453 343 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 CHKAP35790 457 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 BCAT1P54687 386 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 MAP3K7CLP57077 242 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 RPS14P62263 151 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 RACK1P63244 317 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 BNIP3Q12983 259 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 KLHDC10Q6PID8 442 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 SERPINA13PQ6UXR4 307 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ACOT1Q86TX2 421 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ZNF366Q8N895 744 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 RFFLQ8WZ73 363 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 NAF1Q96HR8 494 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 SLC6A18Q96N87 628 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 LGMNQ99538 433 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ACE2Q9BYF1 805 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 SDCBP2Q9H190 292 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms