RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 HCAR3P49019 387 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 FNTAP49354 379 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CLCN4P51793 760 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 PITX1P78337 314 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 LMNB2Q03252 620 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 TWF1Q12792 350 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 GPM6BQ13491 265 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 MTMR3Q13615 1198 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 SIX1Q15475 284 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CCNG2Q16589 344 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RAB6CQ53S08 254 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ANKRD20A8PQ5CZ79 823 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ZC3H12AQ5D1E8 599 aaKnown RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 PLPP4Q5VZY2 271 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 FAM109BQ6ICB4 259 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 DRICH1Q6PGQ1 229 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 KLHDC10Q6PID8 442 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ELMSAN1Q6PJG2 1045 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CCDC137Q6PK04 289 aaKnown RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 TAC4Q86UU9 113 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CCDC185Q8N715 623 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 KREMEN2Q8NCW0 462 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 LRRN4CLQ8ND94 238 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 GRK7Q8WTQ7 553 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 TSC1Q92574 1164 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CASP10Q92851 521 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RNF34Q969K3 372 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 FAF2Q96CS3 445 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RNF157Q96PX1 679 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 HAPLN3Q96S86 360 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 KRT12Q99456 494 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RAB6CQ9H0N0 254 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 OSBPL2Q9H1P3 480 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 DHX35Q9H5Z1 703 aaKnown RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 PCDH18Q9HCL0 1135 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 KLHL11Q9NVR0 708 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 OSER1Q9NX31 292 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ARHGEF38Q9NXL2 777 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 COX16Q9P0S2 106 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 MAGED2Q9UNF1 606 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RANBP2P49792 3224 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 HIDE1A8MVS5 230 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 GRM6O15303 877 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TLR5O60602 858 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 CST8O60676 142 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 FGF19O95750 216 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 CD48P09326 243 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 KRT10P13645 584 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TGM2P21980 687 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 IL4RP24394 825 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 HOXA9P31269 272 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 COILP38432 576 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 NR2C2P49116 596 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ATXN1P54253 815 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 RING1Q06587 406 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 CAMK1Q14012 370 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TRIP4Q15650 581 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 PPP6R3Q5H9R7 873 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 C10orf120Q5SQS8 335 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 HECTD3Q5T447 861 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 KAZNQ674X7 775 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 SLC9A4Q6AI14 798 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 BZW1Q7L1Q6 419 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ADAT2Q7Z6V5 191 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 DNAJB7Q7Z6W7 309 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 RFX6Q8HWS3 928 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 KLHL7Q8IXQ5 586 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ZDHHC14Q8IZN3 488 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 PRELID2Q8N945 189 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ATL2Q8NHH9 583 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ADAM32Q8TC27 787 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 SLCO2A1Q92959 643 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 MAGOHBQ96A72 148 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ACSF2Q96CM8 615 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 SLC39A13Q96H72 371 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 C1orf74Q96LT6 269 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 ZNF512Q96ME7 567 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 EPAS1Q99814 870 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 LRRC1Q9BTT6 524 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 HEMGNQ9BXL5 484 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 DCLK3Q9C098 648 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TKTL2Q9H0I9 626 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 DDX47Q9H0S4 455 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 SLC28A3Q9HAS3 691 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 MTMR10Q9NXD2 777 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 STIM2Q9P246 746 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 SLC12A6Q9UHW9 1150 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 DRG1Q9Y295 367 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 YBX2Q9Y2T7 364 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 HBS1LQ9Y450 684 aaKnown RBP8.93□□□□□ -0.98
TRAF3-209ENST00000560463 CLUHO75153 1309 aa8.93□□□□□ -0.98
TRAF3-209ENST00000560463 TCRBV7S2A1N4TA0A589 114 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ZNF840PA6NDX5 716 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 FAM187AA6NFU0 413 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 SOBPA7XYQ1 873 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 KCNU1A8MYU2 1149 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 H3BRJ5 948 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms