RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SMPD4Q9NXE4 827 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 CDH22Q9UJ99 828 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 MRPS23Q9Y3D9 190 aaKnown RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 PCDHA3Q9Y5H8 950 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 PI4K2BG5E9Z4 385 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 ZNF197O14709 1029 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 SRGAP2O75044 1071 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 TBX10O75333 385 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 MOSPD3O75425 235 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 APOEP02649 317 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 CKMP06732 381 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 KRT7P08729 469 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 RARAP10276 462 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 HOXB8P17481 243 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 CEBPBP17676 345 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 HDCP19113 662 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 CCR1P32246 355 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 CXCR3P49682 368 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 RWDD2BP57060 319 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 DLX2Q07687 328 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 KRT81Q14533 505 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 TRIP4Q15650 581 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 CLUL1Q15846 466 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 PRSS36Q5K4E3 855 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 ERMARDQ5T6L9 678 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 LRRC38Q5VT99 294 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 KLHDC10Q6PID8 442 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 SYCE2Q6PIF2 218 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 GPR149Q86SP6 731 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 CCDC50Q8IVM0 306 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 ZNF276Q8N554 614 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 ALG3Q92685 438 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 SLC22A12Q96S37 553 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 OSBPL9Q96SU4 736 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 RNF38Q9H0F5 515 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 TKTL2Q9H0I9 626 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 DHX35Q9H5Z1 703 aaKnown RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 WDR6Q9NNW5 1121 aaKnown RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 TMPRSS4Q9NRS4 437 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM1-221ENST00000559831 DDX56Q9NY93 547 aaKnown RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 CLEC1BQ9P126 229 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 FZD10Q9ULW2 581 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 SNX12Q9UMY4 172 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 AP4E1Q9UPM8 1137 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 TLR6Q9Y2C9 796 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 HBS1LQ9Y450 684 aaKnown RBP10.84□□□□□ -0.67
TPM1-221ENST00000559831 CPQQ9Y646 472 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 LAMA3Q16787 3333 aa10.84□□□□□ -0.67
TPM1-221ENST00000559831 DENND4AQ7Z401 1863 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 LRRD1A4D1F6 860 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 CEP104O60308 925 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 FSHRP23945 695 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-221ENST00000559831 PEX5P50542 639 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 KCNQ1P51787 676 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 KPNA1P52294 538 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 CDH6P55285 790 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 NNTQ13423 1086 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 PPP2R5DQ14738 602 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 CA9Q16790 459 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 BOLA3Q53S33 107 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 BRMS1LQ5PSV4 323 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 PAPD7Q5XG87 772 aaKnown RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 CES5AQ6NT32 575 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 GET4Q7L5D6 327 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 POLNQ7Z5Q5 900 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 KATNAL2Q8IYT4 538 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 KCTD6Q8NC69 237 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 TEKT4Q8WW24 435 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 PPM1EQ8WY54 764 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 CAPZA3Q96KX2 299 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 KCTD15Q96SI1 283 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 CDX2Q99626 313 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 KLF16Q9BXK1 252 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 SLC46A2Q9BY10 475 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 SMG9Q9H0W8 520 aaKnown RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 RRAGDQ9NQL2 400 aaPredicted RBP10.83□□□□□ -0.68
TPM1-221ENST00000559831 GKN1Q9NS71 199 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-221ENST00000559831 SNX10Q9Y5X0 201 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 SAR1BQ9Y6B6 198 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 CLUHO75153 1309 aa10.83□□□□□ -0.68
TPM1-221ENST00000559831 DOCK8Q8NF50 2099 aa10.82□□□□□ -0.68
TPM1-221ENST00000559831 ZNF185O15231 689 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms