RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SLC47A2Q86VL8 602 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 LONP2Q86WA8 852 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 ZNF677Q86XU0 584 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 PASD1Q8IV76 773 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 FAM71AQ8IYT1 594 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 CHPFQ8IZ52 775 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MAML2Q8IZL2 1156 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 CPXM2Q8N436 756 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 AOPEPQ8N6M6 819 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 GPR161Q8N6U8 529 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 ZNF513Q8N8E2 541 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 NAT16Q8N8M0 369 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TERB1Q8NA31 727 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 ZBTB44Q8NCP5 570 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 C1orf131Q8NDD1 294 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 TSTD1Q8NFU3 115 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 NEK11Q8NG66 645 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 NDRG1Q92597 394 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 RUBCNQ92622 972 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 BHMTQ93088 406 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 RNF34Q969K3 372 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TMA16Q96EY4 203 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 ZSWIM1Q9BR11 485 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 SLC4A5Q9BY07 1137 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 IRX2Q9BZI1 471 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 FBRSL1Q9HCM7 1045 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 POLMQ9NP87 494 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 ACP6Q9NPH0 428 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MARK1Q9P0L2 795 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TJP2Q9UDY2 1190 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 LIMA1Q9UHB6 759 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 GMEB2Q9UKD1 530 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 AGO1Q9UL18 857 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 STAP1Q9ULZ2 295 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TLR6Q9Y2C9 796 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 PAXBP1Q9Y5B6 917 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 FHOD1Q9Y613 1164 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 R4GN57 208 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MYO15AQ9UKN7 3530 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ZFHX2Q9C0A1 2572 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 PRR23AA6NEV1 266 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 K7EQS6 105 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 K7ESF4 209 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 AXIN1O15169 862 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PAPSS1O43252 624 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 MSI1O43347 362 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 TIMM44O43615 452 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SYNCRIPO60506 623 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 GREM1O60565 184 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 RPP40O75818 363 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 GFPT2O94808 682 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 KLF8O95600 359 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 PENKP01210 267 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 CALCAP01258 141 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 KLKB1P03952 638 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ATP5BP06576 529 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 TPM3P06753 285 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ZNF18P17022 549 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 DESP17661 470 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CCR1P32246 355 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CLCN1P35523 988 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SOX5P35711 763 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NSFP46459 744 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 SLC6A11P48066 632 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 RNASE9P60153 205 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 KDSRQ06136 332 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 KCNMA1Q12791 1236 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NME3Q13232 169 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CDH18Q13634 790 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 BYSLQ13895 437 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 SIM2Q14190 667 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 GAS6Q14393 721 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 DMC1Q14565 340 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 EIF4HQ15056 248 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 CRY1Q16526 586 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 ACBD5Q5T8D3 534 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 NAIF1Q69YI7 327 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 OR6B2Q6IFH4 312 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 MSANTD2Q6P1R3 559 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 TRIM72Q6ZMU5 477 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SND1Q7KZF4 910 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNX1-205ENST00000559339 SLC26A9Q7LBE3 791 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 BHLHA9Q7RTU4 235 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ANKS1BQ7Z6G8 1248 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 C11orf74Q86VG3 221 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 C12orf40Q86WS4 652 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ERICH1Q86X53 443 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ETFBKMTQ8IXQ9 262 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PGBD3Q8N328 593 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 ALLCQ8N6M5 410 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PDCD7Q8N8D1 485 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 IL17RCQ8NAC3 791 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 TXNDC5Q8NBS9 432 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 USP33Q8TEY7 942 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CLEC4CQ8WTT0 213 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NELL1Q92832 810 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 AZIN2Q96A70 460 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 C18orf8Q96DM3 657 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms