RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CDC14CA4D256 554 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 SPECC1L-ADORA2AF8WAN1 911 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MAN2B1O00754 1011 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 P4HA2O15460 535 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 GNA14O95837 355 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 EDN3P14138 238 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 PFKLP17858 780 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 HDCP19113 662 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 PPP3CCP48454 512 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MLLT6P55198 1093 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 SLC7A9P82251 487 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 ANGPT1Q15389 498 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 SNX30Q5VWJ9 437 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 ARHGAP17Q68EM7 881 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MAML2Q8IZL2 1156 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 TTC39CQ8N584 583 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 PDZD8Q8NEN9 1154 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 FAM3CQ92520 227 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 TMEM176AQ96HP8 235 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 CNOT6LQ96LI5 555 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 NSUN5Q96P11 429 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 EBF3Q9H4W6 596 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 FAM124BQ9H5Z6 455 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 C8orf33Q9H7E9 229 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 THG1LQ9NWX6 298 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 CHORDC1Q9UHD1 332 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 SALL4Q9UJQ4 1053 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MRPS17Q9Y2R5 130 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 CPQQ9Y646 472 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 WNT6Q9Y6F9 365 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 PTPRZ1P23471 2315 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 ATG2BQ96BY7 2078 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 MYOFQ9NZM1 2061 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 OTOGLQ3ZCN5 2332 aa6.35□□□□□ -1.39
CTDSPL2-204ENST00000558966 LEFTY2O00292 366 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CYP26A1O43174 497 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 COCHO43405 550 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 AFPP02771 609 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CCDC192P0DO97 292 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TRIM21P19474 475 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TBXAS1P24557 533 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RPS9P46781 194 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PDE6CP51160 858 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 KPNA1P52294 538 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 KIF11P52732 1056 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RUNX3Q13761 415 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ITPRIPL2Q3MIP1 535 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 NAIF1Q69YI7 327 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TTC30AQ86WT1 665 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RALGPS2Q86X27 583 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ARHGEF19Q8IW93 802 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 OSCP1Q8WVF1 389 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ATOH1Q92858 354 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 MSANTD3Q96H12 275 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 NT5C1BQ96P26 610 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 GBP4Q96PP9 640 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 NELL2Q99435 816 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 DUSP16Q9BY84 665 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 IRX2Q9BZI1 471 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 INTS2Q9H0H0 1204 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CCSER2Q9H7U1 834 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PNPLA8Q9NP80 782 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 COMMD8Q9NX08 183 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 OSER1Q9NX31 292 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ATXN7L1Q9ULK2 861 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 SCML2Q9UQR0 700 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TULP2O00295 520 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 FGFR1OPO95684 399 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 MBL2P11226 248 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CHRNB1P11230 501 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 MAGEA9P43362 315 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TUBP50607 506 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 YWHAEP62258 255 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CTBSQ01459 385 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 GAS6Q14393 721 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PON2Q15165 354 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PDGFRLQ15198 375 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 GOLGA7BQ2TAP0 167 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 CC2D1AQ6P1N0 951 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RBM43Q6ZSC3 357 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RRAGAQ7L523 313 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 C1orf210Q8IVY1 113 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PPM1KQ8N3J5 372 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TFAP2BQ92481 460 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 WBP2Q969T9 261 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 KREMEN1Q96MU8 473 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ZSWIM1Q9BR11 485 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 ECT2Q9H8V3 914 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 NMUR1Q9HB89 426 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 RBM12Q9NTZ6 932 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 DUS2Q9NX74 493 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 TSPAN16Q9UKR8 245 aa6.34□□□□□ -1.39
CTDSPL2-204ENST00000558966 PCDHGB7Q9Y5F8 929 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms