RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 LRP3O75074 770 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 ADAM23O75077 832 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 RPP40O75818 363 aaKnown RBP11.73□□□□□ -0.53
BMP4-204ENST00000558961 RETP07949 1114 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CISD3P0C7P0 127 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
BMP4-204ENST00000558961 DGKEP52429 567 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 SEC13P55735 322 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 RING1Q06587 406 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 NNTQ13423 1086 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CKAP5Q14008 2032 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 NR1I3Q14994 352 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 EOGTQ5NDL2 527 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 RNF43Q68DV7 783 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 RALGAPA1Q6GYQ0 2036 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 DENND1BQ6P3S1 775 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 TPGS1Q6ZTW0 290 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 TMEM110Q86TL2 294 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 DENND1CQ8IV53 801 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 FMNL3Q8IVF7 1028 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 DCLK2Q8N568 766 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 ALLCQ8N6M5 410 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 TSTD1Q8NFU3 115 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CLEC4CQ8WTT0 213 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 EDEM1Q92611 657 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 ZC3H10Q96K80 434 aaKnown RBP11.73□□□□□ -0.53
BMP4-204ENST00000558961 NAP1L5Q96NT1 182 aaPredicted RBP11.73□□□□□ -0.53
BMP4-204ENST00000558961 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
BMP4-204ENST00000558961 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CD248Q9HCU0 757 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 ACP6Q9NPH0 428 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 CYTH4Q9UIA0 394 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 RAB23Q9ULC3 237 aa11.73□□□□□ -0.53
BMP4-204ENST00000558961 PTPRZ1P23471 2315 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 TBC1D3BA6NDS4 549 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PRRT4C9JH25 899 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 SGK1O00141 431 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 TRIM24O15164 1050 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PAPSS1O43252 624 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 THAP12O43422 761 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 KLF8O95600 359 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 FYNP06241 537 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 TIE1P35590 1138 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PBX1P40424 430 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PXNP49023 591 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 HARS2P49590 506 aaKnown RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 DGKGP49619 791 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PDCLQ13371 301 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 EMC10Q5UCC4 262 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 PRR23BQ6ZRT6 265 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 TRMT11Q7Z4G4 463 aaKnown RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 FAM71AQ8IYT1 594 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 FAM160A2Q8N612 972 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 ZNF513Q8N8E2 541 aaPredicted RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 TXNDC5Q8NBS9 432 aaKnown RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 MDGA1Q8NFP4 955 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 OLIG1Q8TAK6 271 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 LOXL4Q96JB6 756 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 HINFPQ9BQA5 517 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 XPO4Q9C0E2 1151 aaKnown RBP11.72□□□□□ -0.53
BMP4-204ENST00000558961 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 SFMBT1Q9UHJ3 866 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 DNAJC12Q9UKB3 198 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 GMEB2Q9UKD1 530 aa11.72□□□□□ -0.53
BMP4-204ENST00000558961 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 WDR87Q6ZQQ6 2873 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 NUP205Q92621 2012 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 E5RJQ4 531 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 PIK3R2O00459 728 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
BMP4-204ENST00000558961 IGLV3-25P01717 112 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 HMBSP08397 361 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 HOXD9P28356 352 aaPredicted RBP11.71□□□□□ -0.53
BMP4-204ENST00000558961 PTK2Q05397 1052 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.53
BMP4-204ENST00000558961 ENPP2Q13822 863 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 HSP90AA4PQ58FG1 418 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 WDTC1Q8N5D0 677 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 GOLGA1Q92805 767 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 AZIN2Q96A70 460 aa11.71□□□□□ -0.53
BMP4-204ENST00000558961 PIWIL1Q96J94 861 aaKnown RBP11.71□□□□□ -0.53
BMP4-204ENST00000558961 SERPINB11Q96P15 392 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms