RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 GPN3Q9UHW5 284 aaPredicted RBP10.32□□□□□ -0.76
SPG11-212ENST00000558790 KLK13Q9UKR3 277 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 ARHGAP26Q9UNA1 814 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 AGAP1Q9UPQ3 857 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 PTPRBP23467 1997 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 PLXNB3Q9ULL4 1909 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 K7EQS6 105 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 HYAL3O43820 417 aaPredicted RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 NFATC1O95644 943 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 HNRNPLP14866 589 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPG11-212ENST00000558790 TCF3P15923 654 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 COL8A1P27658 744 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 LONP1P36776 959 aaKnown RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 CASP5P51878 434 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 PSMC1P62191 440 aaKnown RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 ZXDBP98169 803 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 MESP2Q0VG99 397 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 USP39Q53GS9 565 aaKnown RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 DAB2IPQ5VWQ8 1189 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 SPATA2LQ8IUW3 424 aaPredicted RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 FMR1NBQ8N0W7 255 aaPredicted RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 LRRC52Q8N7C0 313 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 MYLPFQ96A32 169 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 KLHDC7BQ96G42 594 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 FUBP3Q96I24 572 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPG11-212ENST00000558790 STRA6Q9BX79 667 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 LINC00597Q9H2U6 94 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 MRPL44Q9H9J2 332 aaKnown RBP10.31□□□□□ -0.76
SPG11-212ENST00000558790 GDAP2Q9NXN4 497 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 TBC1D7Q9P0N9 293 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 SIX4Q9UIU6 781 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 ITGA11Q9UKX5 1188 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 MMP17Q9ULZ9 603 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 SNX9Q9Y5X1 595 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 PTPRJQ12913 1337 aa10.31□□□□□ -0.76
SPG11-212ENST00000558790 GOLGA8IPA6NC78 632 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 GOLGA8JA6NMD2 632 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 PIK3R2O00459 728 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 GABRDO14764 452 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 SCAMP3O14828 347 aaKnown RBP10.3□□□□□ -0.76
SPG11-212ENST00000558790 ATP2C2O75185 946 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 CYP17A1P05093 508 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 KRT19P08727 400 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 PCSK1P29120 753 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 MAGEA11P43364 429 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 DHPSP49366 369 aaPredicted RBP10.3□□□□□ -0.76
SPG11-212ENST00000558790 RAC1P63000 192 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 POSTNQ15063 836 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 SOWAHAQ2M3V2 549 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 LMBRD2Q68DH5 695 aaPredicted RBP10.3□□□□□ -0.76
SPG11-212ENST00000558790 USP49Q70CQ1 688 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 C11orf74Q86VG3 221 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 CCDC33Q8N5R6 958 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 TOP6BLQ8N6T0 577 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 FSIP1Q8NA03 581 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 SPATA18Q8TC71 538 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 KBTBD7Q8WVZ9 684 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 EPSTI1Q96J88 318 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 TMX3Q96JJ7 454 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 CBWD1Q9BRT8 395 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 FGFBP2Q9BYJ0 223 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 STK17AQ9UEE5 414 aa10.3□□□□□ -0.76
SPG11-212ENST00000558790 ATXN2Q99700 1313 aaKnown RBP10.3□□□□□ -0.76
SPG11-212ENST00000558790 KNL1Q8NG31 2342 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 MYMKA6NI61 221 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 LEFTY2O00292 366 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 DDX3YO15523 660 aaKnown RBP10.29□□□□□ -0.76
SPG11-212ENST00000558790 C1QL1O75973 258 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 GCNT3O95395 438 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 BMP15O95972 392 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 RECKO95980 971 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 B3GALT4O96024 378 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 CEACAM1P13688 526 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 HDCP19113 662 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 CSRP1P21291 193 aaKnown RBP10.29□□□□□ -0.76
SPG11-212ENST00000558790 LHX1P48742 406 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 IRX4P78413 519 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 GSTM4Q03013 218 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 RABEP1Q15276 862 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
SPG11-212ENST00000558790 CRY1Q16526 586 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 UAP1L1Q3KQV9 507 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 FAM171BQ6P995 826 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 ALLCQ8N6M5 410 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 DEFB124Q8NES8 71 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 CCDC26Q8TAB7 109 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 OLIG1Q8TAK6 271 aa10.29□□□□□ -0.76
SPG11-212ENST00000558790 NOC3LQ8WTT2 800 aaKnown RBP10.29□□□□□ -0.76
SPG11-212ENST00000558790 CACTINQ8WUQ7 758 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms