RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SESN2P58004 480 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 DAOAP59103 153 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 OASLQ15646 514 aaKnown RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZKSCAN8Q15776 578 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 TTC9BQ8N6N2 239 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 SEC14L1Q92503 715 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 KLHL8Q9P2G9 620 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 H3BRJ5 948 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 NBNO60934 754 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZNF623O75123 536 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 IVDP26440 423 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 IRAK1P51617 712 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 PPP2R2AP63151 447 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 TLE2Q04725 743 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 LRIG3Q6UXM1 1119 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 C3orf62Q6ZUJ4 267 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 PID1Q7Z2X4 250 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 UBN1Q9NPG3 1134 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 UBP1Q9NZI7 540 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 SCN10AQ9Y5Y9 1956 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 ITGAVP06756 1048 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CREB1P16220 341 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 KLRC2P26717 231 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 L1CAMP32004 1257 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLC5A3P53794 718 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CAV1Q03135 178 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 SPARCL1Q14515 664 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 TRMT10CQ7L0Y3 403 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 PPIL6Q8IXY8 311 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 C4orf33Q8N1A6 199 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 PQLC3Q8N755 202 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 SH3GL2Q99962 352 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 APOL2Q9BQE5 337 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 SUFUQ9UMX1 484 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 C9IYK1 514 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 FAM72CH0Y354 149 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 GABRDO14764 452 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 MFSD11O43934 449 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CCL5P13501 91 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CRADDP78560 199 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 FAM72AQ5TYM5 149 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 FAM72DQ6L9T8 149 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 PRSS55Q6UWB4 352 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 C4orf50Q6ZRC1 276 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 FAM72BQ86X60 149 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 VPS52Q8N1B4 723 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 CPT1BQ92523 772 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 KLC2Q9H0B6 622 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 TET1Q8NFU7 2136 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 RASA4BC9J798 803 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 RASA4O43374 803 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 USP12O75317 370 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 TMEM63AO94886 807 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 EFEMP1Q12805 493 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 NOMO1Q15155 1222 aa11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 THOC1Q96FV9 657 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 TRIM56Q9BRZ2 755 aaKnown RBP11.19□□□□□ -0.62
CSPG4P5-201ENST00000558731 H0YGN5 161 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 GBP2P32456 591 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ALDH7A1P49419 539 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TRIM60Q495X7 471 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 FNBP1LQ5T0N5 605 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 EIF1ADQ8N9N8 165 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ACBD6Q9BR61 282 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 GPR62Q9BZJ7 368 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TMEM39AQ9NV64 488 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DSEQ9UL01 958 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 NFS1Q9Y697 457 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DAB1O75553 588 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 CHN1P15882 459 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 PTPN9P43378 593 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DSC3Q14574 896 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TFAP2DQ7Z6R9 452 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 MRPL10Q7Z7H8 261 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TAC4Q86UU9 113 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DIS3LQ8TF46 1054 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 CABS1Q96KC9 395 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms