RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 YTHDF1Q9BYJ9 559 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 OLAHQ9NV23 265 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 GOLGA8QA0A0J9YX86 632 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 GOLGA8OA6NCC3 632 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 GOLGA8NF8WBI6 632 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 NOL3O60936 208 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 H2AFYO75367 372 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CYTH1Q15438 398 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CEP55Q53EZ4 464 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CES4AQ5XG92 561 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 TRIM50Q86XT4 487 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 NDUFAF2Q8N183 169 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CBWD1Q9BRT8 395 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 PCIF1Q9H4Z3 704 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 COPS7BQ9H9Q2 264 aaPredicted RBP16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 DCDC2Q9UHG0 476 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
HMBOX1-212ENST00000558662 IGLV3-22A0A075B6J6 115 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 FAM170AA1A519 330 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 WTIPA6NIX2 430 aaPredicted RBP16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 OXSR1O95747 527 aaPredicted RBP16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 C7P10643 843 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 HNRNPFP52597 415 aaKnown RBP16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 PPIL2Q13356 520 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 NAB1Q13506 487 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 DPYSL3Q14195 570 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 KCNJ11Q14654 390 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 ITPRIPL1Q6GPH6 555 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 PPM1NQ8N819 430 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 GSDMBQ8TAX9 411 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 CCDC17Q96LX7 622 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 FBXL18Q96ME1 805 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF641Q96N77 438 aaPredicted RBP16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 PCDHGB4Q9UN71 923 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 PCDHGB5Q9Y5G0 923 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 GAKO14976 1311 aa16.67■□□□□ 0.26
HMBOX1-212ENST00000558662 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 CFAP99D6REC4 459 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 TOM1L1O75674 476 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 FGF3P11487 239 aaPredicted RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 GJC1P36383 396 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 MAGEA6P43360 314 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PSMD8P48556 350 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 CCT8P50990 548 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 NDST2P52849 883 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 MRPS22P82650 360 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 MGAT5BQ3V5L5 792 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 WDR44Q5JSH3 913 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF362Q5T0B9 420 aaPredicted RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 DAW1Q8N136 415 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ACTL9Q8TC94 416 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 SREK1Q8WXA9 508 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF778Q96MU6 729 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PHF12Q96QT6 1004 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 UHRF1Q96T88 793 aaPredicted RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PKP2Q99959 881 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 C11orf70Q9BRQ4 267 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 EFHD1Q9BUP0 239 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 C20orf27Q9GZN8 174 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 GBA3Q9H227 469 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 CAAP1Q9H8G2 361 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 TRNAU1APQ9NX07 287 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 IVNS1ABPQ9Y6Y0 642 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PI4K2BG5E9Z4 385 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF195O14628 629 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 GIPC1O14908 333 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 APOEP02649 317 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 JAK1P23458 1154 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 RHBDL3P58872 404 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 PSMC5P62195 406 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 IKBKEQ14164 716 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 NANOGP8Q6NSW7 305 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 NEK10Q6ZWH5 1172 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 FASTKD5Q7L8L6 764 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 CTAGE3PQ8IX95 158 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 LILRA2Q8N149 483 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 HSPH1Q92598 858 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 TMIGD2Q96BF3 282 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 WRNIP1Q96S55 665 aa16.66■□□□□ 0.26
HMBOX1-212ENST00000558662 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms