RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RBSNQ9H1K0 784 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 FAM204AQ9H8W3 233 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 TLR6Q9Y2C9 796 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 SYNJ2BP-COX16A0A087WUM0 186 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 NEDD8-MDP1E9PL57 170 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 IRAK2O43187 625 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 LATS1O95835 1130 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 IGLV3-27P01718 113 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 SKILP12757 684 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 COL9A1P20849 921 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 DRD1P21728 446 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 CASP14P31944 242 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 GBP1P32455 592 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 NOS2P35228 1153 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 MATKP42679 507 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 RPS9P46781 194 aaKnown RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 SLC6A11P48066 632 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 TRIM14Q14142 442 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 PHLDB2Q86SQ0 1253 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 C12orf40Q86WS4 652 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 NAT16Q8N8M0 369 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 BHMTQ93088 406 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 FCRL2Q96LA5 508 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 SYT11Q9BT88 431 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 BBS2Q9BXC9 721 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 TRIM5Q9C035 493 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 FBRSL1Q9HCM7 1045 aaKnown RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD3-205ENST00000558428 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 COX16Q9P0S2 106 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 WDR35Q9P2L0 1181 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
SMAD3-205ENST00000558428 CACNA1HO95180 2353 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 MOCS2O96007 188 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 EGFP01133 1207 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 IGLV3-25P01717 112 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 APOEP02649 317 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 CYBBP04839 570 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 CALB1P05937 261 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 TYRP14679 529 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 SLC11A2P49281 568 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 NUBP1P53384 320 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 KDSRQ06136 332 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 PTP4A2Q12974 167 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 CCINQ13939 588 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 ZC3H12AQ5D1E8 599 aaKnown RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 ACAD10Q6JQN1 1059 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 SARM1Q6SZW1 724 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 VSTM4Q8IW00 320 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 CPXM2Q8N436 756 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 SYN2Q92777 582 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 RNF34Q969K3 372 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 SLC39A13Q96H72 371 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 PNKPQ96T60 521 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 PRRX2Q99811 253 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 CHRDQ9H2X0 955 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-205ENST00000558428 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
SMAD3-205ENST00000558428 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 M0QYT0 321 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 AP5Z1O43299 807 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 CACNG3O60359 315 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 ACSL4O60488 711 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 TSPAN3O60637 253 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 TULP3O75386 442 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 APODP05090 189 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 TPM1P09493 284 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 FLT3P36888 993 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 SULT1E1P49888 294 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 GSCP56915 257 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 NME3Q13232 169 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms