RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 USP17L7P0C7H9 530 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 MYBL2P10244 700 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 P4HA1P13674 534 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 NDST1P52848 882 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ZXDBP98169 803 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 IFRD2Q12894 506 aaPredicted RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 USP4Q13107 963 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 CUL2Q13617 745 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 RUNX3Q13761 415 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 PON2Q15165 354 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ZNF77Q15935 545 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ITPRIPL2Q3MIP1 535 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ACOT1Q86TX2 421 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 FAM35AQ86V20 835 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 FAM76AQ8TAV0 307 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 PBKQ96KB5 322 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 NIF3L1Q9GZT8 377 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 PRMT8Q9NR22 394 aaPredicted RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 TRPM5Q9NZQ8 1165 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 NENFQ9UMX5 172 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 CNTN6Q9UQ52 1028 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 A0A087X0T9 212 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ZNF840PA6NDX5 716 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 TNFRSF10BO14763 440 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 FAM228BP0C875 321 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 CCDC130P13994 396 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ARSAP15289 507 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ACO1P21399 889 aaKnown RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 GGCXP38435 758 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 TAF10Q12962 218 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 ZNF528Q3MIS6 628 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 C1orf228Q6PIY5 440 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
TPM1-212ENST00000558347 VPS36Q86VN1 386 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 FAM71AQ8IYT1 594 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 FUKQ8N0W3 1084 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 CRYBG2Q8N1P7 616 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 UBR7Q8N806 425 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 C1orf131Q8NDD1 294 aaKnown RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 TTC16Q8NEE8 873 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 KAT5Q92993 513 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 TWNKQ96RR1 684 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 MED10Q9BTT4 135 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 RNF38Q9H0F5 515 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 ZNF292O60281 2723 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 GOLGA6CA6NDK9 693 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 BUB1O43683 1085 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 HSF2BPO75031 334 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 BEST1O76090 585 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 GOLGA6DP0CG33 693 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 TDGF1P13385 188 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 HDCP19113 662 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 INCA1Q0VD86 236 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 CCINQ13939 588 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 ZC3H14Q6PJT7 736 aaKnown RBP10.78□□□□□ -0.68
TPM1-212ENST00000558347 Q6ZS52 159 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 UNC93AQ86WB7 457 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 NUP93Q8N1F7 819 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 C12orf29Q8N999 325 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 SLC2A14Q8TDB8 520 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 SH3RF2Q8TEC5 729 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 WHAMMQ8TF30 809 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 OSCP1Q8WVF1 389 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 NELL1Q92832 810 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 CALR3Q96L12 384 aaKnown RBP10.78□□□□□ -0.68
TPM1-212ENST00000558347 SMOQ99835 787 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 SYT11Q9BT88 431 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM1-212ENST00000558347 KRT82Q9NSB4 513 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 FAM49BQ9NUQ9 324 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 GOLGA6AQ9NYA3 693 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 EHD2Q9NZN4 543 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 TMEM59LQ9UK28 342 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 ARHGAP26Q9UNA1 814 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 WNT6Q9Y6F9 365 aa10.78□□□□□ -0.68
TPM1-212ENST00000558347 LEFTY2O00292 366 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 AP1G2O75843 785 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 OLFM2O95897 454 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 OAS1P00973 400 aaKnown RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 LMNAP02545 664 aaKnown RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 TCF3P15923 654 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 CD58P19256 250 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 YWHAQP27348 245 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 GJA4P35212 333 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 PPP3CCP48454 512 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 SLC5A3P53794 718 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 YWHAEP62258 255 aaKnown RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 SATB1Q01826 763 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 SLC20A2Q08357 652 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 LRRC32Q14392 662 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 PDGFRLQ15198 375 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms