RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 TPGS1Q6ZTW0 290 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 ENOSF1Q7L5Y1 443 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 BPHLQ86WA6 291 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 TMEM25Q86YD3 366 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 PGBD3Q8N328 593 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 CCDC33Q8N5R6 958 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 EHBP1Q8NDI1 1231 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 USP33Q8TEY7 942 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 UBXN4Q92575 508 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 KLF16Q9BXK1 252 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 ABCC13Q9NSE7 274 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 DNAJC17Q9NVM6 304 aaKnown RBP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 MARCH2Q9P0N8 246 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 BCCIPQ9P287 314 aaKnown RBP eCLIP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 RWDD2AQ9UIY3 292 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 RASAL2Q9UJF2 1139 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
SCFD1-222ENST00000556768 MMP17Q9ULZ9 603 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 PCDHB11Q9Y5F2 797 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 ANK1P16157 1881 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 LAMA1P25391 3075 aa7.68□□□□□ -1.18
SCFD1-222ENST00000556768 MED7O43513 233 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 TULP3O75386 442 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 KRT5P13647 590 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 BMP6P22004 513 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 SLC6A11P48066 632 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 MFAP3P55082 362 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 SPEM2Q0P670 501 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 CNGA2Q16280 664 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 RAB41Q5JT25 222 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 PM20D1Q6GTS8 502 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 GRAMD4Q6IC98 578 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 ANO7Q6IWH7 933 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 PKN3Q6P5Z2 889 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 LCLAT1Q6UWP7 414 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 RRAGAQ7L523 313 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 DGLUCYQ7Z3D6 616 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 FAM114A1Q8IWE2 563 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 TRIM59Q8IWR1 403 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 CHPFQ8IZ52 775 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 ZNF513Q8N8E2 541 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-222ENST00000556768 C12orf50Q8NA57 414 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-222ENST00000556768 TXNDC5Q8NBS9 432 aaKnown RBP7.67□□□□□ -1.18
SCFD1-222ENST00000556768 UBA3Q8TBC4 463 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 KCTD13Q8WZ19 329 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 SPACA7Q96KW9 195 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 NMUR1Q9HB89 426 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 UBE2TQ9NPD8 197 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-222ENST00000556768 CNGB3Q9NQW8 809 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 SEMA4GQ9NTN9 838 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 C2orf42Q9NWW7 574 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 OSER1Q9NX31 292 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 TSC2P49815 1807 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 TCHHQ07283 1943 aa7.67□□□□□ -1.18
SCFD1-222ENST00000556768 SLC12A8A0AV02 714 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 GOLGA6L22H0YM25 854 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 SART1O43290 800 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 KLF8O95600 359 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 HMBSP08397 361 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 LCP1P13796 627 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ERCC5P28715 1186 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 MTIF2P46199 727 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 DGKGP49619 791 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 PGFP49763 221 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ZNF445P59923 1031 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ARID5AQ03989 594 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 KDSRQ06136 332 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ADIGQ0VDE8 80 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 SRSF5Q13243 272 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 NAA30Q147X3 362 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 CSRP2Q16527 193 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 C10orf76Q5T2E6 689 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 BSPRYQ5W0U4 402 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 GBP6Q6ZN66 633 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 SCD5Q86SK9 330 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ALLCQ8N6M5 410 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 TERB1Q8NA31 727 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 IL17RCQ8NAC3 791 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 BHMTQ93088 406 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 HSFY1Q96LI6 401 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 TRIM62Q9BVG3 475 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ULBP1Q9BZM6 244 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ST7Q9NRC1 585 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 PCDHGA5Q9Y5G8 931 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 OTOGLQ3ZCN5 2332 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 M0QYV0 167 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 O00370 1275 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 PES1O00541 588 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 NPC1O15118 1278 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 MDM4O15151 490 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 CACNG3O60359 315 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 STC2O76061 302 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 FBXO21O94952 628 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 NTSR1P30989 418 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 CORO1AP31146 461 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 USP8P40818 1118 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms