RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 DCLK1O15075 740 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 HOXB2P14652 356 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 GBP1P32455 592 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 MFAP3P55082 362 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
SNX6-207ENST00000556303 CAMK4Q16566 473 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
SNX6-207ENST00000556303 MPPE1Q53F39 396 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 LPCAT2Q7L5N7 544 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 UNC45BQ8IWX7 931 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 CHPFQ8IZ52 775 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 ZNF557Q8N988 423 aaPredicted RBP13.17□□□□□ -0.3
SNX6-207ENST00000556303 KAT5Q92993 513 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 KREMEN1Q96MU8 473 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 UBE2TQ9NPD8 197 aaPredicted RBP13.17□□□□□ -0.3
SNX6-207ENST00000556303 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNX6-207ENST00000556303 HCN2Q9UL51 889 aa13.17□□□□□ -0.3
SNX6-207ENST00000556303 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 PLXND1Q9Y4D7 1925 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 A0A1W2PQF6 199 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 TCRBV21S2A2A0A5A6 115 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 ANTXRLA6NF34 631 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 TRIM24O15164 1050 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 IRAK2O43187 625 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 CAVIN2O95810 425 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 LTFP02788 710 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 HMBSP08397 361 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 LCP1P13796 627 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
SNX6-207ENST00000556303 HOXD12P35452 270 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 GPD2P43304 727 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 CREB5Q02930 508 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 RING1Q06587 406 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 NNTQ13423 1086 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 ENPP2Q13822 863 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 EGFLAMQ63HQ2 1017 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 GBP6Q6ZN66 633 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
SNX6-207ENST00000556303 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
SNX6-207ENST00000556303 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
SNX6-207ENST00000556303 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
SNX6-207ENST00000556303 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
SNX6-207ENST00000556303 NUP205Q92621 2012 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 PI4KAP42356 2102 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 MAP3K13O43283 966 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 AP5Z1O43299 807 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
SNX6-207ENST00000556303 SLC11A2P49281 568 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 STARD3Q14849 445 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 TRIM65Q6PJ69 517 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.3
SNX6-207ENST00000556303 EDEM1Q92611 657 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 MED15Q96RN5 788 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
SNX6-207ENST00000556303 PLK2Q9NYY3 685 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 APEX2Q9UBZ4 518 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 ACACBO00763 2458 aa13.15□□□□□ -0.3
SNX6-207ENST00000556303 KHNYNO15037 678 aaKnown RBP13.14□□□□□ -0.31
SNX6-207ENST00000556303 GDF9O60383 454 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 GABBR2O75899 941 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 KRT5P13647 590 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 GABRG2P18507 467 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 RGS7P49802 495 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 SF3A2Q15428 464 aaKnown RBP13.14□□□□□ -0.31
SNX6-207ENST00000556303 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
SNX6-207ENST00000556303 RNF43Q68DV7 783 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 CYP2U1Q7Z449 544 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 TMEM110Q86TL2 294 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 IRF2BP1Q8IU81 584 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 WFIKKN2Q8TEU8 576 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 BHMTQ93088 406 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 TMA16Q96EY4 203 aaKnown RBP13.14□□□□□ -0.31
SNX6-207ENST00000556303 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms