RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TYMPP19971 482 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 PAX3P23760 479 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 CDC25AP30304 524 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 PRPHP41219 470 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 FNTBP49356 437 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 EPHB3P54753 998 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 YWHAHQ04917 246 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 SIM2Q14190 667 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 MYBPC2Q14324 1141 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 KRT79Q5XKE5 535 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 SLC38A3Q99624 504 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 RAB34Q9BZG1 259 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 C2orf42Q9NWW7 574 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 TUBGCP4Q9UGJ1 667 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 GPR160Q9UJ42 338 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 RAB23Q9ULC3 237 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 TIMM13Q9Y5L4 95 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-204ENST00000556268 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 CCDC163A0A0D9SF12 145 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 PP2D1A8MPX8 630 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 LACTBL1A8MY62 500 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 PIRO00625 290 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 ALDH1A3P47895 512 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 SLC12A3P55017 1021 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 LILRA4P59901 499 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 PLD1Q13393 1074 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 LRRC32Q14392 662 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 NOLC1Q14978 699 aaKnown RBP eCLIP9.68□□□□□ -0.862e-26■■■■■ 43.1
GTF2A1-204ENST00000556268 LPAL2Q16609 132 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 ARHGAP29Q52LW3 1261 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 ATAD1Q8NBU5 361 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 CSGALNACT1Q8TDX6 532 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 PSMG2Q969U7 264 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 LOXL4Q96JB6 756 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 RBM12Q9NTZ6 932 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 KCND2Q9NZV8 630 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 UBQLN1Q9UMX0 589 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 YIPF1Q9Y548 306 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 SDK1Q7Z5N4 2213 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 COL4A2P08572 1712 aa9.68□□□□□ -0.86
GTF2A1-204ENST00000556268 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 ANO9A1A5B4 782 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 SLC38A8A6NNN8 435 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 NOTOA8MTQ0 251 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 PSPNO60542 156 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 ZNF205O95201 554 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 FGF19O95750 216 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 OR4Q2P0C623 313 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 CXCL8P10145 99 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 GALK1P51570 392 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 KPNA1P52294 538 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 LIMK1P53667 647 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 SPAG1Q07617 926 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 STRN3Q13033 797 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 SRSF5Q13243 272 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 KYAT1Q16773 422 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 STXBP5Q5T5C0 1151 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 WDR5BQ86VZ2 330 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 EPB41L4BQ9H329 900 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 TASP1Q9H6P5 420 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 GTSE1Q9NYZ3 720 aa9.67□□□□□ -0.86
GTF2A1-204ENST00000556268 MAP1BP46821 2468 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 ZFHX4Q86UP3 3567 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 A0A0B4J269 797 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 MTMR11A4FU01 709 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 H0YCG3 227 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 PIGRP01833 764 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 ZNF806P0C7X5 589 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 SCP2P22307 547 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 HOXC13P31276 330 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 TNFSF9P41273 254 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 TUFMP49411 452 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 NCKAP1LP55160 1127 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 TMEM196Q5HYL7 178 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 Q6ZS52 159 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 HAUS6Q7Z4H7 955 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 USP37Q86T82 979 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 CD302Q8IX05 232 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 C19orf47Q8N9M1 422 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 DDX1Q92499 740 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 CHFRQ96EP1 664 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 ZFYVE19Q96K21 471 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 SENP8Q96LD8 212 aa9.66□□□□□ -0.86
GTF2A1-204ENST00000556268 PGLYRP2Q96PD5 576 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms