RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 BRINP2Q9C0B6 783 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CARD9Q9H257 536 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 GOLPH3Q9H4A6 298 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 ZFYVE1Q9HBF4 777 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CHST12Q9NRB3 414 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SEMA4GQ9NTN9 838 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 PARVAQ9NVD7 372 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 MSRB2Q9Y3D2 182 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 NLRC5Q86WI3 1866 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 hCG_2014768A0A024R1R8 64 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 GOLGA6L10A0A0M3HER8 536 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 KRIT1O00522 736 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 MEFVO15553 781 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 KLF4O43474 513 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CILPO75339 1184 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RPS6KA5O75582 802 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RECQL4O94761 1208 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CAPNS1P04632 268 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 C8BP07358 591 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 VDRP11473 427 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CYP3A5P20815 502 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 COMTP21964 271 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 MMP8P22894 467 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RRM1P23921 792 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CDH5P33151 784 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ETFBP38117 255 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CETN2P41208 172 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 PNPLA4P41247 253 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RAD23BP54727 409 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CFHR1Q03591 330 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ADAM15Q13444 863 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 GPM6BQ13491 265 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CAMK1Q14012 370 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RAB33AQ14088 237 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 STILQ15468 1287 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ZBTB6Q15916 424 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CSRP2Q16527 193 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 LONRF2Q1L5Z9 754 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 SEL1L2Q5TEA6 688 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TWF2Q6IBS0 349 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 GDF6Q6KF10 455 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CC2D1AQ6P1N0 951 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CNKSR3Q6P9H4 555 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ALKAL1Q6UXT8 129 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 MMS22LQ6ZRQ5 1243 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 MON1BQ7L1V2 547 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 HDXQ7Z353 690 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 LYSMD3Q7Z3D4 306 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 IFT20Q8IY31 132 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CCDC26Q8TAB7 109 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 FEZF2Q8TBJ5 459 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM40Q8WWA1 233 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM176AQ96HP8 235 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RHOVQ96L33 236 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 HEXIM2Q96MH2 286 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF560Q96MR9 790 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 SRPK1Q96SB4 655 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 PNKPQ96T60 521 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ZSWIM1Q9BR11 485 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TRIM56Q9BRZ2 755 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 LRRC1Q9BTT6 524 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 APOL6Q9BWW8 343 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 MIS12Q9H081 205 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 LHX5Q9H2C1 402 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TIMMDC1Q9NPL8 285 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 RBM12Q9NTZ6 932 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CLEC1BQ9P126 229 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 WDR35Q9P2L0 1181 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 ANAPC7Q9UJX3 599 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 TTC7AQ9ULT0 858 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 BARX2Q9UMQ3 279 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 NOC2LQ9Y3T9 749 aaKnown RBP7.16□□□□□ -1.26
SLIRP-204ENST00000555890 PCDHA3Q9Y5H8 950 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 CDY2AQ9Y6F7 541 aa7.16□□□□□ -1.26
SLIRP-204ENST00000555890 SMIM28A0A1B0GU29 152 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM238LA0A1B0GVL6 79 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 ABHD14A-ACY1A0A1B0GW23 586 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 FAM170AA1A519 330 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PROSCO94903 275 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 FGGP02679 453 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 ITGA4P13612 1032 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 KCNE1P15382 129 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CTNNA1P35221 906 aaKnown RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 RAP1GAPP47736 663 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 GUCY2FP51841 1108 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CDH8P55286 799 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 RWDD2BP57060 319 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SNX16P57768 344 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF252P-AS1Q0IIN9 211 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 INCA1Q0VD86 236 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 MAMLD1Q13495 774 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CNGA2Q16280 664 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PTGISQ16647 500 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms