RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NCANO14594 1321 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HEPACAM2A8MVW5 462 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 GOLGA8SH3BPF8 625 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 H2AFZP0C0S5 128 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RALAP11233 206 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 FCARP24071 287 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 DDX6P26196 483 aaKnown RBP eCLIP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ACADSBP45954 432 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 PPP3CCP48454 512 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 DAOAP59103 153 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RNASE9P60153 205 aaKnown RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 EFEMP1Q12805 493 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 NNTQ13423 1086 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RPS6KA1Q15418 735 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TAF5Q15542 800 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 PTPN20Q4JDL3 420 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 C8orf74Q6P047 294 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 EMBQ6PCB8 327 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 FAM183BPQ6ZVS7 135 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 H2AFVQ71UI9 128 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ERICH1Q86X53 443 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 YAF2Q8IY57 180 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 EIF1ADQ8N9N8 165 aaKnown RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TTC8Q8TAM2 541 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RNF139Q8WU17 664 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 KCTD13Q8WZ19 329 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 USP13Q92995 863 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ZFYVE19Q96K21 471 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HSFY1Q96LI6 401 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 PCDHB18PQ96TA0 734 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 LHX5Q9H2C1 402 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RASAL2Q9UJF2 1139 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HPCAL4Q9UM19 191 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 CPQQ9Y646 472 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TICRRQ7Z2Z1 1910 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 ATG2BQ96BY7 2078 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 FAM92AA1XBS5 289 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 PAPSS1O43252 624 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 GDI1P31150 447 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 ATP5C1P36542 298 aaKnown RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 TNNT3P45378 269 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 NOMO3P69849 1222 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 BSPRYQ5W0U4 402 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 VITQ6UXI7 678 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 MMS22LQ6ZRQ5 1243 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 IFT20Q8IY31 132 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 ARHGAP18Q8N392 663 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SH3RF2Q8TEC5 729 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 OVCA2Q8WZ82 227 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 CAVIN3Q969G5 261 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 PIWIL1Q96J94 861 aaKnown RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 LRRC3BQ96PB8 259 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 C11orf70Q9BRQ4 267 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 LRRC1Q9BTT6 524 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SELENOOQ9BVL4 669 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 COL25A1Q9BXS0 654 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 CNGB3Q9NQW8 809 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
PSEN1-213ENST00000555386 CFAP97Q9P2B7 532 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SFMBT1Q9UHJ3 866 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 ADAM21Q9UKJ8 722 aa10.29□□□□□ -0.76
PSEN1-213ENST00000555386 SYNJ2BP-COX16A0A087WUM0 186 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 ANHXE9PGG2 379 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 LEFTY2O00292 366 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 DDX3XO00571 662 aaKnown RBP eCLIP10.28□□□□□ -0.76
PSEN1-213ENST00000555386 CAPN9O14815 690 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 FBXO21O94952 628 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 GJB6O95452 261 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 LSM8O95777 96 aaKnown RBP10.28□□□□□ -0.76
PSEN1-213ENST00000555386 LTFP02788 710 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 ZDHHC11BP0C7U3 371 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 NCAM1P13591 858 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 NSFP46459 744 aaKnown RBP10.28□□□□□ -0.76
PSEN1-213ENST00000555386 GPC5P78333 572 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TDGQ13569 410 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 BHLHA9Q7RTU4 235 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TMEM110Q86TL2 294 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 HOMEZQ8IX15 550 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 CELF5Q8N6W0 485 aaKnown RBP10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 RIN3Q8TB24 985 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 ACTRT1Q8TDG2 376 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 STK32AQ8WU08 396 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms