RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 GHRP10912 638 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 EIF4A1P60842 406 aaKnown RBP4.86□□□□□ -1.63
LINC01197-202ENST00000555332 DEUP1Q05D60 604 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 TTLL4Q14679 1199 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 PRICKLE4Q2TBC4 344 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 USP39Q53GS9 565 aaKnown RBP4.86□□□□□ -1.63
LINC01197-202ENST00000555332 STXBP5Q5T5C0 1151 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 CWF19L1Q69YN2 538 aaKnown RBP4.86□□□□□ -1.63
LINC01197-202ENST00000555332 FAM111BQ6SJ93 734 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 RBM12BQ8IXT5 1001 aaKnown RBP4.86□□□□□ -1.63
LINC01197-202ENST00000555332 SYCP3Q8IZU3 236 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 AOPEPQ8N6M6 819 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 GOLGA6L1Q8N7Z2 621 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 GMCL1P1Q8NEA9 526 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 FAM216AQ8WUB2 273 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 MR1Q95460 341 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 SNX27Q96L92 541 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 SMARCAD1Q9H4L7 1026 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 NCOR1P1Q9H4R4 102 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 PDE11AQ9HCR9 933 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 ZNF304Q9HCX3 659 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 LTB4R2Q9NPC1 389 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 G6PC2Q9NQR9 355 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 TMED5Q9Y3A6 229 aa4.86□□□□□ -1.63
LINC01197-202ENST00000555332 LINC01387J3KSC0 135 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 DLL1O00548 723 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PCDH17O14917 1159 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SNPHO15079 494 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TMPRSS2O15393 492 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ST18O60284 1047 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 MATN4O95460 622 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 GNAI2P04899 355 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 MYBL1P10243 752 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 EGR1P18146 543 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CCNA2P20248 432 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 BMPR1AP36894 532 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 LUMP51884 338 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SOX8P57073 446 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 KCNJ10P78508 379 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 FAM189BP81408 668 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SP140Q13342 867 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 LSAMPQ13449 338 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ZRANB3Q5FWF4 1079 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 RNFT1Q5M7Z0 435 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 KSR1Q8IVT5 923 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 NEK11Q8NG66 645 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 OR6B3Q8NGW1 331 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SLC22A18Q96BI1 424 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ABHD17AQ96GS6 310 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TCTN2Q96GX1 697 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ZNF396Q96N95 335 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 NT5C3AQ9H0P0 336 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CD93Q9NPY3 652 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SLC35C2Q9NQQ7 365 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 KCNH7Q9NS40 1196 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 HOMER3Q9NSC5 361 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CHCHD3Q9NX63 227 aaKnown RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 USP18Q9UMW8 372 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PCDHGA5Q9Y5G8 931 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PCDHGA1Q9Y5H4 931 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CDY2AQ9Y6F7 541 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 NUMBLQ9Y6R0 609 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 V9GYY5 206 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 BLMP54132 1417 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 DOT1LQ8TEK3 1739 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PCDH11XQ9BZA7 1347 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PCDH11YQ9BZA8 1340 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ARHGEF10O15013 1369 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CLRN2A0PK11 232 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 SOBPA7XYQ1 873 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 MYO1BO43795 1136 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PPP6R2O75170 966 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 C4AP0C0L4 1744 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 C4BP0C0L5 1744 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PRKCIP41743 596 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CPA2P48052 419 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 DIO1P49895 249 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TARDBPQ13148 414 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 CTBP1Q13363 440 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 HLFQ16534 295 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 MAN2A1Q16706 1144 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 NHSL2Q5HYW2 709 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 RBM20Q5T481 1227 aaKnown RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TMEM154Q6P9G4 183 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 LIAT1Q6ZQX7 453 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 KIAA0408Q6ZU52 694 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 FAM160B2Q86V87 743 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 RNF214Q8ND24 703 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 OR56A3Q8NH54 315 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 NOC3LQ8WTT2 800 aaKnown RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TUBGCP5Q96RT8 1024 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 FUZQ9BT04 418 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 PHF7Q9BWX1 381 aaPredicted RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
LINC01197-202ENST00000555332 VPS16Q9H269 839 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 TDP1Q9NUW8 608 aa4.85□□□□□ -1.63
LINC01197-202ENST00000555332 ANO10Q9NW15 660 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms