RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TBC1D5Q92609 795 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 NPIPB3Q92617 1050 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 PRRX2Q99811 253 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 THAP7Q9BT49 309 aaPredicted RBP6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 MECRQ9BV79 373 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 TOR3AQ9H497 397 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 SAP30LQ9HAJ7 183 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 TFCP2L1Q9NZI6 479 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 FOXJ2Q9P0K8 574 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 ASAP1Q9ULH1 1129 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 PCDHB7Q9Y5E2 793 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 MBD3L5A6NJ08 208 aaPredicted RBP6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 PYGLP06737 847 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 CKMT1AP12532 417 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 ALADP13716 330 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 RXRAP19793 462 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 RBM5P52756 815 aaKnown RBP eCLIP6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 PSG6Q00889 435 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 LMAN2Q12907 356 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 JAKMIP3Q5VZ66 844 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 ACSM6Q6P461 480 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 CRIP3Q6Q6R5 217 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 C12orf76Q8N812 135 aaPredicted RBP6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 CEP70Q8NHQ1 597 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 GLMPQ8WWB7 406 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 HERVK_113Q902F9 699 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 USP29Q9HBJ7 922 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 NOD2Q9HC29 1040 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 PI4KBQ9UBF8 816 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 KCND3Q9UK17 655 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 DERAQ9Y315 318 aa6.12□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3DA0A087WVF3 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3IA0A087WXS9 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3EA0A087X179 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3KA0A087X1G2 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3BA6NDS4 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3FA6NER0 549 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3LB9A6J9 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 M0QZQ0 153 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SEPT4O43236 478 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SUV39H1O43463 412 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 AGR2O95994 175 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3HP0C7X1 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 DRD4P21917 467 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 DUSP1P28562 367 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 GRK5P34947 590 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 JAK3P52333 1124 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 GPC5P78333 572 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TLE2Q04725 743 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TLE3Q04726 772 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 RNASELQ05823 741 aaKnown RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBX2Q13207 712 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 ANKRD1Q15327 319 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 IGFL4Q6B9Z1 124 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 KIRREL2Q6UWL6 708 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SYT13Q7L8C5 426 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC29A4Q7RTT9 530 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 NAXEQ8NCW5 288 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC2A12Q8TD20 617 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 LARP4BQ92615 738 aaKnown RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 COG8Q96MW5 612 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SNX18Q96RF0 628 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 MAF1Q9H063 256 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 CDCP1Q9H5V8 836 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 CHODLQ9H9P2 273 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC13A4Q9UKG4 626 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 ST3GAL5Q9UNP4 418 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 PCDHB2Q9Y5E7 798 aa6.11□□□□□ -1.43
CKS1BP1-201ENST00000555221 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 C3orf70A6NLC5 250 aaPredicted RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 M0QYT0 321 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 MATN3O15232 486 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 HNRNPRO43390 633 aaKnown RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 C1RP00736 705 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 ELFN1P0C7U0 828 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 INSRRP14616 1297 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 FPR3P25089 353 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 ITPKBP27987 946 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 RPL15P61313 204 aaKnown RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 CFHR3Q02985 330 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 UBE3AQ05086 875 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC12A1Q13621 1099 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 ERCC6LQ2NKX8 1250 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 LAIR1Q6GTX8 287 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 WDR93Q6P2C0 686 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 C16orf89Q6UX73 402 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 FSIP1Q8NA03 581 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 USP38Q8NB14 1042 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 SIMC1Q8NDZ2 872 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 NEU4Q8WWR8 484 aaPredicted RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 ASB12Q8WXK4 309 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms