RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DCLK3Q9C098 648 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 SEMA4AQ9H3S1 761 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 IP6K2Q9UHH9 426 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 YIPF1Q9Y548 306 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 PRRG1O14668 218 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 NDC80O14777 642 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 BEST1O76090 585 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 CALB1P05937 261 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 ATP5DP30049 168 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 RHBDF2Q6PJF5 856 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 C4orf50Q6ZRC1 276 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 EP400NLQ6ZTU2 488 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 TAOK1Q7L7X3 1001 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 FAM35AQ86V20 835 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 SPATA2LQ8IUW3 424 aaPredicted RBP18.09■□□□□ 0.49
SHOX-204ENST00000554971 RELL1Q8IUW5 271 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 OTUD6BQ8N6M0 293 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 STKLD1Q8NE28 680 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 HNRNPABQ99729 332 aaKnown RBP18.09■□□□□ 0.49
SHOX-204ENST00000554971 UBE2ZQ9H832 354 aaPredicted RBP18.09■□□□□ 0.49
SHOX-204ENST00000554971 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 MAFFQ9ULX9 164 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 OBSL1O75147 1896 aa18.09■□□□□ 0.49
SHOX-204ENST00000554971 H3BQ06 376 aaPredicted RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 TCEA3O75764 348 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 HAPLN1P10915 354 aaPredicted RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 KLF1Q13351 362 aaPredicted RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 SKIV2LQ15477 1246 aaKnown RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 SDHAF4Q5VUM1 108 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 TMC5Q6UXY8 1006 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 RCOR2Q8IZ40 523 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 CCDC89Q8N998 374 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 SERPINB12Q96P63 405 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 SEPT5Q99719 369 aaPredicted RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 APOL5Q9BWW9 433 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 S1PR5Q9H228 398 aa18.08■□□□□ 0.49
SHOX-204ENST00000554971 PPANQ9NQ55 473 aaKnown RBP18.08■□□□□ 0.49
SHOX-204ENST00000554971 DENND4AQ7Z401 1863 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 O00370 1275 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 RASGRF2O14827 1237 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 BRD2P25440 801 aaKnown RBP18.08■□□□□ 0.48
SHOX-204ENST00000554971 ADORA2BP29275 332 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 ELF1P32519 619 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 SEC24CP53992 1094 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 COPS2P61201 443 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 DDR2Q16832 855 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 SKIDA1Q1XH10 827 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 MGAT5BQ3V5L5 792 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 DRICH1Q6PGQ1 229 aaPredicted RBP18.08■□□□□ 0.48
SHOX-204ENST00000554971 C6orf89Q6UWU4 347 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 TTC30AQ86WT1 665 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 ZMIZ2Q8NF64 920 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 GPR152Q8TDT2 470 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 RAPGEF5Q92565 580 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 KCNK16Q96T55 309 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 CCDC134Q9H6E4 229 aa18.08■□□□□ 0.48
SHOX-204ENST00000554971 ANAPC1Q9H1A4 1944 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 CCDC195A0A1B0GUA6 201 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 SHBGP04278 402 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 CFHP08603 1231 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 CD19P15391 556 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 KCNA5P22460 613 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 MMP8P22894 467 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 IVDP26440 423 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 MAGEA11P43364 429 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 KCNJ1P48048 391 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 TWF1Q12792 350 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 ARHGAP17Q68EM7 881 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 CCDC149Q6ZUS6 474 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 SMRP1Q8NCR6 262 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 RBM41Q96IZ5 413 aaKnown RBP18.07■□□□□ 0.48
SHOX-204ENST00000554971 XPO6Q96QU8 1125 aaKnown RBP18.07■□□□□ 0.48
SHOX-204ENST00000554971 SMOQ99835 787 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 SFXN1Q9H9B4 322 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 KRT82Q9NSB4 513 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 DZANK1Q9NVP4 752 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 ZDHHC7Q9NXF8 308 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 ASIC3Q9UHC3 531 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 TSPAN16Q9UKR8 245 aa18.07■□□□□ 0.48
SHOX-204ENST00000554971 F8VP50 259 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 CCL16O15467 120 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 VDRP11473 427 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 HOXA9P31269 272 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 SSTR3P32745 418 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 PPM1LQ5SGD2 360 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 RARS2Q5T160 578 aaKnown RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 VSTM1Q6UX27 236 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 CLEC20AQ6ZU45 233 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 TAX1BP1Q86VP1 789 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 CPNE8Q86YQ8 564 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 C1orf54Q8WWF1 131 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 HLA-CQ95604 372 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 OSBPL8Q9BZF1 889 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 CSNK1G1Q9HCP0 422 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 DPP7Q9UHL4 492 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 MYO16Q9Y6X6 1858 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 NRG2O14511 850 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 FSBPO95073 299 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms