RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 MARK1Q9P0L2 795 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 KCNK3O14649 394 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 TBX18O95935 607 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 CISD3P0C7P0 127 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 ATICP31939 592 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 HNF1BP35680 557 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 IL12RB1P42701 662 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 CCT8P50990 548 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 CDH8P55286 799 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 IL9RQ01113 521 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 EHHADHQ08426 723 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 BIRC3Q13489 604 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 PKP1Q13835 747 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 TMPRSS12Q86WS5 348 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 UCMAQ8WVF2 138 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 PAGE5Q96GU1 130 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 KLF16Q9BXK1 252 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-207ENST00000554927 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-207ENST00000554927 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
TUBB3-207ENST00000554927 ANKRD6Q9Y2G4 727 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
TUBB3-207ENST00000554927 A0A1B0GVL5 298 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 J3QKU1 62 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 AP1G2O75843 785 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 CST3P01034 146 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 PFKFB1P16118 471 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 ATP5C1P36542 298 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 EIF2S3P41091 472 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 PTPRNQ16849 979 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 GRAMD1CQ8IYS0 662 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 LSM14AQ8ND56 463 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 BAP1Q92560 729 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 SMARCD1Q96GM5 515 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 TLR8Q9NR97 1041 aaKnown RBP13.93□□□□□ -0.18
TUBB3-207ENST00000554927 KRT82Q9NSB4 513 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 FRMD4BQ9Y2L6 1034 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 SLCO1B1Q9Y6L6 691 aa13.93□□□□□ -0.18
TUBB3-207ENST00000554927 PDXKO00764 312 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 NPC1O15118 1278 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
TUBB3-207ENST00000554927 TLX3O43711 291 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-207ENST00000554927 GREM1O60565 184 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 P4HA1P13674 534 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 SYKP43405 635 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 PGFP49763 221 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 ZNF132P52740 706 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 CLDN6P56747 220 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 ARID5AQ03989 594 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 KMT5BQ4FZB7 885 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 LAYNQ6UX15 382 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 IGSF8Q969P0 613 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 C6orf106Q9H6K1 298 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-207ENST00000554927 TM9SF3Q9HD45 589 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 IL37Q9NZH6 218 aa13.92□□□□□ -0.18
TUBB3-207ENST00000554927 THAP10Q9P2Z0 257 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-207ENST00000554927 SHROOM3Q8TF72 1996 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 H0Y8X5 98 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-207ENST00000554927 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
TUBB3-207ENST00000554927 EPHX1P07099 455 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 COPAP53621 1224 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 MYL6P60660 151 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 CFHR1Q03591 330 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 STK4Q13043 487 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 ORC1Q13415 861 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 E2F5Q15329 346 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 GEN1Q17RS7 908 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 ZNF667Q5HYK9 610 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 GPR155Q7Z3F1 870 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 C1orf216Q8TAB5 229 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 TNIP3Q96KP6 325 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 CIPCQ9C0C6 399 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 PCED1AQ9H1Q7 454 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 FBXO44Q9H4M3 255 aa13.91□□□□□ -0.18
TUBB3-207ENST00000554927 NAV2Q8IVL1 2488 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 TEX51A0A1B0GUA7 166 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 FAM92AA1XBS5 289 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 CYSRT1A8MQ03 144 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 MDM4O15151 490 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 FSBPO95073 299 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 IGLV3-19P01714 112 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 RPN1P04843 607 aaKnown RBP13.9□□□□□ -0.18
TUBB3-207ENST00000554927 PRKCHP24723 683 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 GRIA4P48058 902 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 MFAP3P55082 362 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 C21orf59P57076 290 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 NCOA4Q13772 614 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 BECN1Q14457 450 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 ZNF234Q14588 700 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 SGSM1Q2NKQ1 1148 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms