RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SULT1C4O75897 302 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 DGKIO75912 1065 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 KLHL2O95198 593 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ZSCAN5DPP0CG00 497 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 PSMC3P17980 439 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 TUBA4AP68366 448 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 TMPRSS15P98073 1019 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 CDKL1Q00532 357 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 MAMLD1Q13495 774 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ARL13BQ3SXY8 428 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ATP13A4Q4VNC1 1196 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 CRLF3Q8IUI8 442 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 RNF169Q8NCN4 708 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 C1orf112Q9NSG2 853 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ANKEF1Q9NU02 776 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SIN3BO75182 1162 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 EGFLAMQ63HQ2 1017 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 C15orf39Q6ZRI6 1047 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 USP37Q86T82 979 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GPD1LQ8N335 351 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 HSPH1Q92598 858 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ISOC1Q96CN7 298 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 NTPCRQ9BSD7 190 aaKnown RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 CYP4F11Q9HBI6 524 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GID8Q9NWU2 228 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SHOC2Q9UQ13 582 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SCINQ9Y6U3 715 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 IQANK1A0A1B0GTG1 560 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 AQP9O43315 295 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 FBXO21O94952 628 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 H6PDO95479 791 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 MMP10P09238 476 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 KITP10721 976 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SSTR1P30872 391 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GSSP48637 474 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GPS1Q13098 491 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 PHKG1Q16816 387 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 PEX5LQ8IYB4 626 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 CPXCR1Q8N123 301 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GALNT4Q8N4A0 578 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 EXD1Q8NHP7 514 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 SYTL5Q8TDW5 730 aaPredicted RBP16.14■□□□□ 0.17
SYNE3-203ENST00000554873 E2F7Q96AV8 911 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 DCUN1D5Q9BTE7 237 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 KLHL11Q9NVR0 708 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 NCKIPSDQ9NZQ3 722 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 EBF1Q9UH73 591 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 DNPEPQ9ULA0 475 aa16.14■□□□□ 0.17
SYNE3-203ENST00000554873 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 PI4K2BG5E9Z4 385 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 PFDN6O15212 129 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 CLASP2O75122 1294 aaKnown RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 C8BP07358 591 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 INHBBP09529 407 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 KRT10P13645 584 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 ETS1P14921 441 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 GLRA2P23416 452 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 ARSEP51690 589 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 RGS21Q2M5E4 152 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 DEFB107AQ8IZN7 70 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 SERAC1Q96JX3 654 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 MARCOQ9UEW3 520 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 PSMD12O00232 456 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 HNRNPDLO14979 420 aaKnown RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 PCYT1AP49585 367 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 CD300CQ08708 224 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 WASHC5Q12768 1159 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 RNASEH2BQ5TBB1 312 aaKnown RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 LIN9Q5TKA1 542 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 KAZNQ674X7 775 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 CIAPIN1Q6FI81 312 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 DENND5BQ6ZUT9 1274 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 CLVS1Q8IUQ0 354 aaPredicted RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 TBC1D15Q8TC07 691 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 FAM151AQ8WW52 585 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 C12orf43Q96C57 262 aaKnown RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 KCNK16Q96T55 309 aa16.13■□□□□ 0.17
SYNE3-203ENST00000554873 TRIM56Q9BRZ2 755 aaKnown RBP16.13■□□□□ 0.17
SYNE3-203ENST00000554873 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 FOXD2O60548 495 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms