RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PRKAR1BP31321 381 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ALDH9A1P49189 494 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PDE6CP51160 858 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ICA1Q05084 483 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CCNIQ14094 377 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 DHX8Q14562 1220 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 KCNAB1Q14722 419 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PUM3Q15397 648 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ZRSR2Q15696 482 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ELF2Q15723 593 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PDCD2Q16342 344 aaPredicted RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GPR162Q16538 588 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PTCHD3Q3KNS1 767 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 AKNAD1Q5T1N1 836 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ERAP2Q6P179 960 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CCDC174Q6PII3 467 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 USP17L6PQ6QN14 398 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CRTC1Q6UUV9 634 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 USP49Q70CQ1 688 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RASAL3Q86YV0 1011 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GLIS1Q8NBF1 620 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 B3GALNT2Q8NCR0 500 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 DNAJB14Q8TBM8 379 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 C18orf8Q96DM3 657 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CHMP4AQ9BY43 222 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ACTRT3Q9BYD9 372 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 KRTAP1-5Q9BYS1 174 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TRIM5Q9C035 493 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CASKIN1Q8WXD9 1431 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RIMS2Q9UQ26 1411 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ADGRB2O60241 1585 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 XRN1Q8IZH2 1706 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SHANK3Q9BYB0 1731 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 EHBP1L1Q8N3D4 1523 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RREB1Q92766 1687 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 COL6A3P12111 3177 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM131LA2VDJ0 1609 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 NRXN3Q9Y4C0 1643 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 NOS1P29475 1434 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ADAMTS13Q76LX8 1427 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 KIAA1107Q9UPP5 1409 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 hCG_1642624A0A1W2PR95 340 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 PPM1DO15297 605 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 CD3EAPO15446 510 aaKnown RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 COQ9O75208 318 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 SKAP2O75563 359 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 CSF1RP07333 972 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 JUPP14923 745 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 WT1P19544 449 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 PCSK6P29122 969 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ADORA2AP29274 412 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ATICP31939 592 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ABCG1P45844 678 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 NXPH1P58417 271 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ITIH3Q06033 890 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 BLMHQ13867 455 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 PTPRRQ15256 657 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 RAB30Q15771 203 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 MAPKAPK3Q16644 382 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM119Q4V9L6 283 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 CERCAMQ5T4B2 595 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 FAXCQ5TGI0 409 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ANO1Q5XXA6 986 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 MZT2AQ6P582 158 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 KIAA0408Q6ZU52 694 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 DTX2Q86UW9 622 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 KRT73Q86Y46 540 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 CERS3Q8IU89 383 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 UNC5CLQ8IV45 518 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ABRAQ8N0Z2 381 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM171Q8WVE6 324 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 OSCP1Q8WVF1 389 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ATRIPQ8WXE1 791 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ATG4AQ8WYN0 398 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 SMG7Q92540 1137 aaKnown RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 SARAFQ96BY9 339 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ZNF668Q96K58 619 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 HERPUD2Q9BSE4 406 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 PCDHAC1Q9H158 963 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ZBTB26Q9HCK0 441 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 NECTIN3Q9NQS3 549 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 KLC4Q9NSK0 619 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 TMOD4Q9NZQ9 345 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 RNF7Q9UBF6 113 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ZMYND8Q9ULU4 1186 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 HPSEQ9Y251 543 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 METP08581 1390 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 KIF15Q9NS87 1388 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 COL22A1Q8NFW1 1626 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-208ENST00000554785 MYOM2P54296 1465 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 C1orf167Q5SNV9 1468 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 NRAPQ86VF7 1730 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 ZFYVE9O95405 1425 aa1.78□□□□□ -2.12
PRPF39-208ENST00000554785 CCNT2O60583 730 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 TLR5O60602 858 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 NBNO60934 754 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PROP1O75360 226 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 CSTBP04080 98 aaKnown RBP1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 1047.1 ms