RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CHCHD4Q8N4Q1 142 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 DEPTORQ8TB45 409 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 PIGOQ8TEQ8 1089 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 GIPC2Q8TF65 315 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 PIGKQ92643 395 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 EAF1Q96JC9 268 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 ACAP3Q96P50 834 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 P2RY13Q9BPV8 354 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CCDC94Q9BW85 323 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 NUSAP1Q9BXS6 441 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 FBRSL1Q9HCM7 1045 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CRTAC1Q9NQ79 661 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 POLR3BQ9NW08 1133 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 MBD1Q9UIS9 605 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 YIPF1Q9Y548 306 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 NID2Q14112 1375 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 MIA3Q5JRA6 1907 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 OTOL1A6NHN0 477 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 OR6C75A6NL08 312 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 FADS2P1A8MWK0 482 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PATE3B3GLJ2 98 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 K7ERI5 159 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 TNFRSF10CO14798 259 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CPLX1O14810 134 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CLEC3AO75596 197 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CPA1P15085 419 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CYP11B2P19099 503 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 HOXA5P20719 270 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 GABRR2P28476 465 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CDC25CP30307 473 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 MCM4P33991 863 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 NAMPTP43490 491 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 DHPSP49366 369 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 TUFMP49411 452 aaKnown RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 ATXN3P54252 364 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 YWHAHQ04917 246 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 RAD51AP2Q09MP3 1159 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 MYBPC2Q14324 1141 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PPP2R5AQ15172 486 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PDGFRLQ15198 375 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 SLC14A2Q15849 920 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 TRIM61Q5EBN2 209 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 SPDYCQ5MJ68 293 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 STXBP5Q5T5C0 1151 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CC2D1AQ6P1N0 951 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CPLX2Q6PUV4 134 aaKnown RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PIK3AP1Q6ZUJ8 805 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 HS2ST1Q7LGA3 356 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 USP37Q86T82 979 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 SYT12Q8IV01 421 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CMTM8Q8IZV2 173 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 HDDC3Q8N4P3 179 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 TSTD1Q8NFU3 115 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 RPLP0P6Q8NHW5 317 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PSMG2Q969U7 264 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 IFT74Q96LB3 600 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 ZMAT2Q96NC0 199 aaKnown RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 NT5C1AQ9BXI3 368 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 SLC46A2Q9BY10 475 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CCDC113Q9H0I3 377 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 EBF3Q9H4W6 596 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CNTD2Q9H8S5 307 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 HPS4Q9NQG7 708 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 HSFX1Q9UBD0 423 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 CNOT6Q9ULM6 557 aaKnown RBP5.23□□□□□ -1.57
ATXN3-229ENST00000554672 KCNJ14Q9UNX9 436 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 TNFSF13BQ9Y275 285 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 INVSQ9Y283 1065 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 KCTD3Q9Y597 815 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 PATJQ8NI35 1801 aa5.23□□□□□ -1.57
ATXN3-229ENST00000554672 ZFYVE26Q68DK2 2539 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 M0QZQ0 153 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 ALDH1A2O94788 518 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 VNN2O95498 520 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 PRAMEF12O95522 483 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 EDN1P05305 212 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 PNLIPP16233 465 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 ENGP17813 658 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 XBP1P17861 261 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 RPS6KB1P23443 525 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 DDX6P26196 483 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 PSMA5P28066 241 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 VIPR1P32241 457 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 GJA4P35212 333 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 AVPR1AP37288 418 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 OSTNP61366 133 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 YBX1P67809 324 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 BYSLQ13895 437 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TAF12Q16514 161 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CALCRLQ16602 461 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TRIM68Q6AZZ1 485 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 ARMCX5Q6P1M9 558 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CCNI2Q6ZMN8 369 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 LPCAT2Q7L5N7 544 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CATSPER3Q86XQ3 398 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 ATAD1Q8NBU5 361 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms